LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Taxol | 180622_BG_8 | 210 | 1.1619 | 488 | 323 | 9 | 13 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_8 | 811 | 0.7943 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.76819 | -0.2592 |
| Taxol | 180622_BG_8 | 237 | 1.0675 | 474 | 285 | 7 | 21 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_7 | 759 | 0.7620 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.73592 | -0.2394 |
| Taxol | 180622_BG_8 | 273 | 1.2663 | 418 | 457 | 14 | 5 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_9 | 875 | 0.7622 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.73607 | -0.2156 |
| Taxol | 180622_BG_7 | 278 | 1.0717 | 266 | 317 | 4 | 12 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_4 | 583 | 0.6771 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.65099 | -0.2125 |
| Taxol | 180622_BG_6 | 290 | 1.1880 | 412 | 422 | 8 | 3 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_3 | 834 | 0.7420 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.71587 | -0.2052 |
| Taxol | 180622_BG_8 | 298 | 1.2594 | 338 | 463 | 14 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_9 | 801 | 0.7288 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.70272 | -0.2005 |
| Taxol | 180622_BG_8 | 300 | 1.1319 | 337 | 384 | 3 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_7 | 721 | 0.7062 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.68005 | -0.1993 |
| Taxol | 180622_BG_6 | 309 | 1.0487 | 389 | 343 | 7 | 19 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_2 | 732 | 0.7032 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.67705 | -0.1942 |
| Taxol | 180622_BG_7 | 320 | 1.1443 | 290 | 408 | 10 | 22 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_4 | 698 | 0.6857 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.65953 | -0.1880 |
| Taxol | 180622_BG_8 | 322 | 1.2092 | 328 | 458 | 10 | 22 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_8 | 786 | 0.7094 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.68326 | -0.1869 |
| Taxol | 180622_BG_6 | 325 | 1.0492 | 326 | 357 | 4 | 18 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_1 | 683 | 0.6776 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.65145 | -0.1852 |
| Taxol | 180622_BG_6 | 326 | 1.1372 | 461 | 434 | 5 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_2 | 895 | 0.7330 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.70688 | -0.1847 |
| Taxol | 180703_BG_10 | 621 | 0.9095 | 230 | 544 | 4 | 18 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_1 | 774 | 0.5548 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.52304 | -0.1839 |
| Taxol | 180703_BG_10 | 624 | 0.9057 | 224 | 544 | 8 | 3 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_3 | 768 | 0.5517 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.51993 | -0.1829 |
| Taxol | 180622_BG_7 | 330 | 1.0590 | 331 | 369 | 13 | 9 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_6 | 700 | 0.6796 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.65349 | -0.1825 |
| Taxol | 180622_BG_7 | 331 | 1.1465 | 331 | 428 | 11 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 2 | MCF10A-GM_5 | 759 | 0.6963 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.67021 | -0.1820 |
| Taxol | 180622_BG_7 | 338 | 1.0106 | 322 | 345 | 11 | 17 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_5 | 667 | 0.6637 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.63756 | -0.1782 |
| Taxol | 180703_BG_11 | 649 | 1.0786 | 522 | 741 | 11 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_5 | 1263 | 0.6606 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.62877 | -0.1747 |
| Taxol | 180703_BG_12 | 652 | 0.8599 | 326 | 515 | 14 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_9 | 841 | 0.5633 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.53150 | -0.1738 |
| Taxol | 180703_BG_12 | 659 | 0.8324 | 224 | 511 | 10 | 22 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_8 | 735 | 0.5273 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.49546 | -0.1715 |
| Taxol | 180622_BG_6 | 353 | 1.0541 | 313 | 389 | 6 | 7 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_3 | 702 | 0.6654 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.63928 | -0.1704 |
| Taxol | 180703_BG_10 | 669 | 0.9051 | 279 | 579 | 7 | 19 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_2 | 858 | 0.5619 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.53009 | -0.1684 |
| Taxol | 180703_BG_11 | 671 | 0.9304 | 363 | 599 | 11 | 17 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_5 | 962 | 0.5891 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.55730 | -0.1677 |
| Taxol | 180703_BG_12 | 684 | 0.9991 | 374 | 683 | 3 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_7 | 1057 | 0.6071 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.57532 | -0.1637 |
| Taxol | 180703_BG_12 | 685 | 0.7589 | 244 | 461 | 14 | 5 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_9 | 705 | 0.5072 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.47540 | -0.1634 |