LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Alpelisib | 180622_MC_15 | 18029 | 0.0201 | 67 | 296 | 14 | 3 | Alpelisib | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_6 | 363 | 0.0197 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00433 | 0.9607 |
| Alpelisib | 180622_MC_16 | 19369 | 0.0273 | 88 | 443 | 5 | 18 | Alpelisib | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_7 | 531 | 0.0267 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00262 | 0.9965 |
| Alpelisib | 180622_MC_16 | 19308 | 0.0303 | 112 | 477 | 7 | 14 | Alpelisib | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_8 | 589 | 0.0296 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00553 | 0.9949 |
| Alpelisib | 180622_MC_16 | 19183 | 0.0272 | 124 | 401 | 9 | 15 | Alpelisib | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_9 | 525 | 0.0266 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00257 | 0.9916 |
| Alpelisib | 180622_MC_14 | 17283 | 0.0244 | 77 | 346 | 3 | 7 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_1 | 423 | 0.0239 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00018 | 0.9399 |
| Alpelisib | 180622_MC_14 | 17780 | 0.0217 | 90 | 298 | 9 | 3 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_2 | 388 | 0.0214 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00271 | 0.9538 |
| Alpelisib | 180622_MC_14 | 18281 | 0.0203 | 51 | 322 | 10 | 18 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_3 | 373 | 0.0200 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00407 | 0.9675 |
| Alpelisib | 180622_MC_15 | 18236 | 0.0239 | 95 | 344 | 8 | 8 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_4 | 439 | 0.0235 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00056 | 0.9663 |
| Alpelisib | 180622_MC_15 | 18389 | 0.0212 | 97 | 294 | 9 | 4 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_5 | 391 | 0.0208 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00325 | 0.9705 |
| Alpelisib | 180622_MC_15 | 18279 | 0.0183 | 52 | 283 | 12 | 21 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_6 | 335 | 0.0180 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00607 | 0.9675 |
| Alpelisib | 180622_MC_16 | 18196 | 0.0239 | 114 | 324 | 3 | 15 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_7 | 438 | 0.0235 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00056 | 0.9652 |
| Alpelisib | 180622_MC_16 | 17822 | 0.0290 | 132 | 388 | 5 | 3 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_8 | 520 | 0.0284 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00428 | 0.9550 |
| Alpelisib | 180622_MC_16 | 18097 | 0.0189 | 74 | 269 | 6 | 5 | Alpelisib | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_9 | 343 | 0.0186 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00547 | 0.9625 |
| Alpelisib | 180622_MC_14 | 16674 | 0.0188 | 54 | 260 | 5 | 20 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_1 | 314 | 0.0185 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00558 | 0.9224 |
| Alpelisib | 180622_MC_14 | 15635 | 0.0178 | 67 | 213 | 11 | 22 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_2 | 280 | 0.0176 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00647 | 0.8914 |
| Alpelisib | 180622_MC_14 | 15720 | 0.0174 | 51 | 223 | 12 | 6 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_3 | 274 | 0.0171 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00694 | 0.8940 |
| Alpelisib | 180622_MC_15 | 16133 | 0.0196 | 86 | 232 | 3 | 3 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_4 | 318 | 0.0193 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00474 | 0.9064 |
| Alpelisib | 180622_MC_15 | 16452 | 0.0163 | 63 | 206 | 3 | 4 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_5 | 269 | 0.0161 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00798 | 0.9159 |
| Alpelisib | 180622_MC_15 | 16732 | 0.0154 | 59 | 200 | 6 | 17 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_6 | 259 | 0.0152 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00882 | 0.9241 |
| Alpelisib | 180622_MC_16 | 17278 | 0.0216 | 88 | 287 | 4 | 14 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_7 | 375 | 0.0212 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00282 | 0.9397 |
| Alpelisib | 180622_MC_16 | 16330 | 0.0204 | 71 | 264 | 6 | 12 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_8 | 335 | 0.0201 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00397 | 0.9123 |
| Alpelisib | 180622_MC_16 | 16692 | 0.0212 | 86 | 270 | 12 | 22 | Alpelisib | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_9 | 356 | 0.0209 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00319 | 0.9229 |
| Alpelisib | 180622_MC_14 | 14046 | 0.0168 | 59 | 178 | 5 | 3 | Alpelisib | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_1 | 237 | 0.0166 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00747 | 0.8409 |
| Alpelisib | 180622_MC_14 | 13798 | 0.0166 | 57 | 173 | 6 | 5 | Alpelisib | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_2 | 230 | 0.0164 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00767 | 0.8327 |
| Alpelisib | 180622_MC_14 | 13462 | 0.0163 | 58 | 163 | 12 | 11 | Alpelisib | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_3 | 221 | 0.0162 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00792 | 0.8213 |