LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Dasatinib | 180619_MC_10 | 6539 | 0.0351 | 68 | 164 | 5 | 17 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_1 | 232 | 0.0343 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.01119 | 0.6658 |
Dasatinib | 180619_MC_10 | 5808 | 0.0366 | 67 | 148 | 6 | 6 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_2 | 215 | 0.0357 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.01262 | 0.6231 |
Dasatinib | 180619_MC_10 | 6606 | 0.0233 | 56 | 99 | 6 | 16 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_3 | 155 | 0.0229 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00015 | 0.6695 |
Dasatinib | 180619_MC_11 | 6318 | 0.0366 | 78 | 156 | 3 | 16 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_4 | 234 | 0.0357 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.01264 | 0.6533 |
Dasatinib | 180619_MC_11 | 6830 | 0.0356 | 71 | 175 | 5 | 11 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_5 | 246 | 0.0348 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.01169 | 0.6818 |
Dasatinib | 180619_MC_11 | 6191 | 0.0325 | 86 | 118 | 10 | 6 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_6 | 204 | 0.0319 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00883 | 0.6460 |
Dasatinib | 180619_MC_12 | 6829 | 0.0315 | 94 | 124 | 4 | 4 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_7 | 218 | 0.0309 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00786 | 0.6817 |
Dasatinib | 180619_MC_12 | 7725 | 0.0337 | 104 | 160 | 6 | 3 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_8 | 264 | 0.0330 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00997 | 0.7277 |
Dasatinib | 180619_MC_12 | 7754 | 0.0301 | 97 | 139 | 12 | 8 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_9 | 236 | 0.0295 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00646 | 0.7291 |
Dasatinib | 180619_MC_10 | 2269 | 0.1002 | 66 | 168 | 8 | 14 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_1 | 234 | 0.0935 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.07041 | 0.3212 |
Dasatinib | 180619_MC_10 | 2087 | 0.0965 | 69 | 139 | 10 | 20 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_2 | 208 | 0.0906 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.06756 | 0.2972 |
Dasatinib | 180619_MC_10 | 2301 | 0.0734 | 43 | 129 | 12 | 12 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_3 | 172 | 0.0696 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.04648 | 0.3253 |
Dasatinib | 180619_MC_11 | 2409 | 0.0720 | 77 | 102 | 4 | 20 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_4 | 179 | 0.0692 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.04609 | 0.3386 |
Dasatinib | 180619_MC_11 | 2212 | 0.1112 | 108 | 150 | 9 | 17 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_5 | 258 | 0.1045 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.08138 | 0.3139 |
Dasatinib | 180619_MC_11 | 2449 | 0.0947 | 64 | 174 | 12 | 9 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_6 | 238 | 0.0886 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.06550 | 0.3435 |
Dasatinib | 180619_MC_12 | 2680 | 0.1092 | 140 | 168 | 3 | 5 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_7 | 308 | 0.1031 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.08000 | 0.3703 |
Dasatinib | 180619_MC_12 | 2248 | 0.1323 | 155 | 163 | 7 | 4 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_8 | 318 | 0.1239 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.10085 | 0.3185 |
Dasatinib | 180619_MC_12 | 3008 | 0.0704 | 87 | 131 | 14 | 17 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_9 | 218 | 0.0676 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.04450 | 0.4053 |
Dasatinib | 180619_MC_10 | 1604 | 0.1423 | 61 | 176 | 3 | 22 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_1 | 237 | 0.1287 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.10566 | 0.2246 |
Dasatinib | 180619_MC_10 | 1575 | 0.1408 | 51 | 178 | 4 | 12 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_2 | 229 | 0.1269 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.10387 | 0.2197 |
Dasatinib | 180619_MC_10 | 1448 | 0.1064 | 46 | 113 | 11 | 3 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_3 | 159 | 0.0989 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.07587 | 0.1975 |
Dasatinib | 180619_MC_11 | 1770 | 0.1450 | 57 | 208 | 6 | 12 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_4 | 265 | 0.1302 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.10715 | 0.2513 |
Dasatinib | 180619_MC_11 | 1447 | 0.1699 | 95 | 167 | 7 | 11 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_5 | 262 | 0.1533 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.13023 | 0.1973 |
Dasatinib | 180619_MC_11 | 1786 | 0.1381 | 61 | 194 | 12 | 13 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_6 | 255 | 0.1249 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.10186 | 0.2537 |
Dasatinib | 180619_MC_12 | 1460 | 0.1430 | 106 | 118 | 8 | 19 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_7 | 224 | 0.1330 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.10994 | 0.1996 |