LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Alpelisib | 180619_MC_12 | 14262 | 0.0280 | 112 | 291 | 5 | 18 | Alpelisib | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_7 | 403 | 0.0275 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00441 | 0.9760 |
Alpelisib | 180619_MC_12 | 14687 | 0.0255 | 116 | 261 | 7 | 14 | Alpelisib | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_8 | 377 | 0.0250 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00195 | 0.9887 |
Alpelisib | 180619_MC_12 | 14400 | 0.0258 | 119 | 256 | 9 | 15 | Alpelisib | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_9 | 375 | 0.0254 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00231 | 0.9802 |
Alpelisib | 180619_MC_10 | 12493 | 0.0244 | 68 | 238 | 3 | 7 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_1 | 306 | 0.0239 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00083 | 0.9195 |
Alpelisib | 180619_MC_10 | 12455 | 0.0248 | 70 | 240 | 9 | 3 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_2 | 310 | 0.0243 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00121 | 0.9182 |
Alpelisib | 180619_MC_10 | 13361 | 0.0190 | 54 | 201 | 10 | 18 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_3 | 255 | 0.0187 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00435 | 0.9479 |
Alpelisib | 180619_MC_11 | 13922 | 0.0212 | 60 | 237 | 8 | 8 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_4 | 297 | 0.0209 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00219 | 0.9656 |
Alpelisib | 180619_MC_11 | 12955 | 0.0226 | 75 | 219 | 9 | 4 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_5 | 294 | 0.0222 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00088 | 0.9348 |
Alpelisib | 180619_MC_11 | 13518 | 0.0192 | 55 | 205 | 12 | 21 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_6 | 260 | 0.0189 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00420 | 0.9529 |
Alpelisib | 180619_MC_12 | 14298 | 0.0299 | 141 | 291 | 3 | 15 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_7 | 432 | 0.0293 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00625 | 0.9771 |
Alpelisib | 180619_MC_12 | 12853 | 0.0304 | 118 | 276 | 5 | 3 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_8 | 394 | 0.0297 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00667 | 0.9315 |
Alpelisib | 180619_MC_12 | 13344 | 0.0213 | 80 | 206 | 6 | 5 | Alpelisib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_9 | 286 | 0.0210 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00209 | 0.9474 |
Alpelisib | 180619_MC_10 | 10838 | 0.0276 | 85 | 216 | 5 | 20 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_1 | 301 | 0.0270 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00395 | 0.8607 |
Alpelisib | 180619_MC_10 | 11649 | 0.0196 | 50 | 179 | 11 | 22 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_2 | 229 | 0.0193 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00379 | 0.8903 |
Alpelisib | 180619_MC_10 | 11265 | 0.0194 | 51 | 168 | 12 | 6 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_3 | 219 | 0.0191 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00400 | 0.8765 |
Alpelisib | 180619_MC_11 | 9376 | 0.0291 | 108 | 168 | 3 | 3 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_4 | 276 | 0.0286 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00552 | 0.8026 |
Alpelisib | 180619_MC_11 | 12320 | 0.0215 | 93 | 174 | 3 | 4 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_5 | 267 | 0.0212 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00186 | 0.9137 |
Alpelisib | 180619_MC_11 | 11277 | 0.0253 | 55 | 232 | 6 | 17 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_6 | 287 | 0.0248 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00174 | 0.8769 |
Alpelisib | 180619_MC_12 | 12636 | 0.0250 | 99 | 220 | 4 | 14 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_7 | 319 | 0.0246 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00155 | 0.9243 |
Alpelisib | 180619_MC_12 | 11792 | 0.0169 | 71 | 130 | 6 | 12 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_8 | 201 | 0.0168 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00631 | 0.8954 |
Alpelisib | 180619_MC_12 | 11466 | 0.0224 | 70 | 188 | 12 | 22 | Alpelisib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_9 | 258 | 0.0220 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00107 | 0.8838 |
Alpelisib | 180619_MC_10 | 8445 | 0.0248 | 73 | 138 | 5 | 3 | Alpelisib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_1 | 211 | 0.0244 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00130 | 0.7618 |
Alpelisib | 180619_MC_10 | 8692 | 0.0262 | 57 | 172 | 6 | 5 | Alpelisib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_2 | 229 | 0.0257 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00260 | 0.7729 |
Alpelisib | 180619_MC_10 | 9282 | 0.0193 | 30 | 150 | 12 | 11 | Alpelisib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_3 | 180 | 0.0190 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00405 | 0.7986 |
Alpelisib | 180619_MC_11 | 9059 | 0.0194 | 51 | 126 | 4 | 9 | Alpelisib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_4 | 177 | 0.0192 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00391 | 0.7891 |