LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Palbociclib | 180615_MC_08 | 12485 | 0.0258 | 76 | 248 | 3 | 19 | Palbociclib | 0.00998 | treatment | 72 | 1 | MCF10A-GM_7 | 324 | 0.0253 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00190 | 1.0020 |
| Palbociclib | 180615_MC_08 | 12372 | 0.0304 | 85 | 294 | 13 | 8 | Palbociclib | 0.00998 | treatment | 72 | 1 | MCF10A-GM_8 | 379 | 0.0297 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00632 | 0.9979 |
| Palbociclib | 180615_MC_08 | 12385 | 0.0236 | 47 | 247 | 14 | 11 | Palbociclib | 0.00998 | treatment | 72 | 1 | MCF10A-GM_9 | 294 | 0.0232 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00021 | 0.9984 |
| Palbociclib | 180615_MC_06 | 9693 | 0.0206 | 27 | 173 | 9 | 7 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_1 | 200 | 0.0202 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00318 | 0.8903 |
| Palbociclib | 180615_MC_06 | 8280 | 0.0251 | 33 | 176 | 9 | 16 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_2 | 209 | 0.0246 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00122 | 0.8239 |
| Palbociclib | 180615_MC_06 | 10214 | 0.0220 | 20 | 205 | 11 | 15 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_3 | 225 | 0.0216 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00184 | 0.9129 |
| Palbociclib | 180615_MC_07 | 12117 | 0.0170 | 36 | 170 | 3 | 10 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_4 | 206 | 0.0167 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00668 | 0.9885 |
| Palbociclib | 180615_MC_07 | 10715 | 0.0125 | 36 | 98 | 3 | 15 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_5 | 134 | 0.0124 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.01105 | 0.9338 |
| Palbociclib | 180615_MC_07 | 10750 | 0.0164 | 34 | 143 | 5 | 3 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_6 | 177 | 0.0162 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00720 | 0.9352 |
| Palbociclib | 180615_MC_08 | 11299 | 0.0362 | 120 | 293 | 4 | 19 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_7 | 413 | 0.0353 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01186 | 0.9572 |
| Palbociclib | 180615_MC_08 | 9008 | 0.0266 | 60 | 181 | 10 | 16 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_8 | 241 | 0.0261 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00266 | 0.8591 |
| Palbociclib | 180615_MC_08 | 10325 | 0.0183 | 15 | 174 | 11 | 3 | Palbociclib | 0.031603333 | treatment | 72 | 1 | MCF10A-GM_9 | 189 | 0.0180 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00542 | 0.9176 |
| Palbociclib | 180615_MC_06 | 5651 | 0.0248 | 31 | 110 | 5 | 12 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_1 | 141 | 0.0243 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00095 | 0.6724 |
| Palbociclib | 180615_MC_06 | 8612 | 0.0254 | 66 | 154 | 8 | 6 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_2 | 220 | 0.0249 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00151 | 0.8402 |
| Palbociclib | 180615_MC_06 | 6439 | 0.0232 | 23 | 127 | 14 | 11 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_3 | 150 | 0.0228 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00063 | 0.7227 |
| Palbociclib | 180615_MC_07 | 7899 | 0.0251 | 101 | 100 | 4 | 11 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_4 | 201 | 0.0248 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00142 | 0.8045 |
| Palbociclib | 180615_MC_07 | 9692 | 0.0171 | 24 | 142 | 5 | 6 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_5 | 166 | 0.0168 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00656 | 0.8902 |
| Palbociclib | 180615_MC_07 | 8200 | 0.0171 | 43 | 98 | 13 | 11 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_6 | 141 | 0.0169 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00649 | 0.8199 |
| Palbociclib | 180615_MC_08 | 8947 | 0.0313 | 77 | 205 | 8 | 17 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_7 | 282 | 0.0306 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00716 | 0.8562 |
| Palbociclib | 180615_MC_08 | 11599 | 0.0238 | 47 | 230 | 12 | 3 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_8 | 277 | 0.0233 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00007 | 0.9689 |
| Palbociclib | 180615_MC_08 | 10177 | 0.0249 | 48 | 207 | 12 | 5 | Palbociclib | 0.099799997 | treatment | 72 | 1 | MCF10A-GM_9 | 255 | 0.0244 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00105 | 0.9113 |
| Palbociclib | 180615_MC_06 | 3737 | 0.0309 | 46 | 71 | 3 | 11 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_1 | 117 | 0.0304 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00696 | 0.5226 |
| Palbociclib | 180615_MC_06 | 5059 | 0.0210 | 25 | 82 | 4 | 21 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_2 | 107 | 0.0207 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00269 | 0.6309 |
| Palbociclib | 180615_MC_06 | 5220 | 0.0229 | 20 | 100 | 9 | 18 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_3 | 120 | 0.0225 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00093 | 0.6426 |
| Palbociclib | 180615_MC_07 | 5653 | 0.0277 | 84 | 75 | 10 | 12 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_4 | 159 | 0.0274 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00396 | 0.6725 |