Growth rate-corrected (GR) dose-response metrics across a panel of 71 breast cancer cell lines treated with a library of small molecule and antibody perturbagens. Dataset 1 of 4: Relative cell counts and normalized growth rate inhibition values across technical replicates. - Dataset (ID:20268)
Download: Excel (XLSX), Comma-separated (CSV)
Cell | Clinical Subtype | Transcriptional Subtype | Small Molecule | Antibody | Perturbagen Target | Perturbagen Class | Perturbagen Concentration | Perturbagen Conc Unit | Biological Replicate ID | Relative Cell Count | Normalized Growth Rate Inhibition Value | Nominal Division Rate |
---|---|---|---|---|---|---|---|---|---|---|---|---|
MCF 10F | NM | - | Valproic acid | HDAC | HDAC | 3000 | uM | 12254.143 | 0.7907 | 0.6934 | 1.4110 | |
MCF 10F | NM | - | Valproic acid | HDAC | HDAC | 15000 | uM | 12254.143 | 0.0128 | -0.9090 | 1.4110 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 0.0384 | uM | 10817.143 | 0.9957 | 0.9946 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 0.192 | uM | 10817.143 | 0.9654 | 0.9557 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 0.96 | uM | 10817.143 | 1.0276 | 1.0349 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 4.8 | uM | 10817.143 | 0.9783 | 0.9722 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 24 | uM | 10817.143 | 0.9667 | 0.9574 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 120 | uM | 10817.143 | 0.9979 | 0.9973 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 600 | uM | 10817.143 | 0.8471 | 0.7998 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 3000 | uM | 10817.143 | 0.5045 | 0.2948 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 15000 | uM | 10817.143 | 0.0123 | -0.8778 | 1.5734 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 0.0384 | uM | 12365.143 | 0.9059 | 0.9189 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 0.192 | uM | 12365.143 | 0.9234 | 0.9343 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 0.96 | uM | 12365.143 | 0.9634 | 0.9690 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 4.8 | uM | 12365.143 | 0.9092 | 0.9218 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 24 | uM | 12365.143 | 0.9359 | 0.9453 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 120 | uM | 12365.143 | 0.9084 | 0.9211 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 600 | uM | 12365.143 | 0.8374 | 0.8566 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 3000 | uM | 12365.143 | 0.4341 | 0.4098 | 2.3865 | |
MCF12A | NM | Basal B | Valproic acid | HDAC | HDAC | 15000 | uM | 12365.143 | 0.0390 | -0.4863 | 2.3865 | |
MCF7 | HR+ | Luminal | Valproic acid | HDAC | HDAC | 0.0384 | uM | 10997.143 | 1.0275 | 1.0864 | 0.6416 | |
MCF7 | HR+ | Luminal | Valproic acid | HDAC | HDAC | 0.192 | uM | 10997.143 | 1.0452 | 1.1426 | 0.6416 | |
MCF7 | HR+ | Luminal | Valproic acid | HDAC | HDAC | 0.96 | uM | 10997.143 | 0.9969 | 0.9902 | 0.6416 | |
MCF7 | HR+ | Luminal | Valproic acid | HDAC | HDAC | 4.8 | uM | 10997.143 | 0.9834 | 0.9485 | 0.6416 | |
MCF7 | HR+ | Luminal | Valproic acid | HDAC | HDAC | 24 | uM | 10997.143 | 0.9822 | 0.9448 | 0.6416 |