LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Alpelisib | 180614_BG_04 | 16048 | 0.0270 | 160 | 277 | 7 | 14 | Alpelisib | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_8 | 437 | 0.0265 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00651 | 0.9717 |
| Alpelisib | 180614_BG_04 | 16458 | 0.0192 | 110 | 208 | 9 | 15 | Alpelisib | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_9 | 318 | 0.0190 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00104 | 0.9834 |
| Alpelisib | 180614_BG_02 | 15804 | 0.0194 | 71 | 237 | 3 | 7 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_1 | 308 | 0.0191 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00088 | 0.9646 |
| Alpelisib | 180614_BG_02 | 16888 | 0.0194 | 31 | 298 | 9 | 3 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_2 | 329 | 0.0191 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00089 | 0.9954 |
| Alpelisib | 180614_BG_02 | 15928 | 0.0147 | 16 | 219 | 10 | 18 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_3 | 235 | 0.0145 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00546 | 0.9682 |
| Alpelisib | 180614_BG_03 | 16178 | 0.0155 | 32 | 219 | 8 | 8 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_4 | 251 | 0.0153 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00472 | 0.9754 |
| Alpelisib | 180614_BG_03 | 16611 | 0.0160 | 72 | 195 | 9 | 4 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_5 | 267 | 0.0158 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00418 | 0.9877 |
| Alpelisib | 180614_BG_03 | 15607 | 0.0144 | 44 | 182 | 12 | 21 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_6 | 226 | 0.0143 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00572 | 0.9588 |
| Alpelisib | 180614_BG_04 | 16160 | 0.0253 | 179 | 234 | 3 | 15 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_7 | 413 | 0.0249 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00492 | 0.9749 |
| Alpelisib | 180614_BG_04 | 15464 | 0.0170 | 49 | 215 | 5 | 3 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_8 | 264 | 0.0168 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00321 | 0.9546 |
| Alpelisib | 180614_BG_04 | 16091 | 0.0216 | 111 | 239 | 6 | 5 | Alpelisib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_9 | 350 | 0.0213 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00129 | 0.9729 |
| Alpelisib | 180614_BG_02 | 13929 | 0.0157 | 24 | 195 | 5 | 20 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_1 | 219 | 0.0155 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00452 | 0.9072 |
| Alpelisib | 180614_BG_02 | 14209 | 0.0190 | 32 | 239 | 11 | 22 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_2 | 271 | 0.0187 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00128 | 0.9162 |
| Alpelisib | 180614_BG_02 | 15179 | 0.0167 | 42 | 212 | 12 | 6 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_3 | 254 | 0.0165 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00354 | 0.9461 |
| Alpelisib | 180614_BG_03 | 14508 | 0.0222 | 114 | 211 | 3 | 3 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_4 | 325 | 0.0219 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00192 | 0.9255 |
| Alpelisib | 180614_BG_03 | 14548 | 0.0177 | 82 | 177 | 3 | 4 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_5 | 259 | 0.0175 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00250 | 0.9268 |
| Alpelisib | 180614_BG_03 | 14611 | 0.0183 | 73 | 196 | 6 | 17 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_6 | 269 | 0.0181 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00192 | 0.9287 |
| Alpelisib | 180614_BG_04 | 14678 | 0.0220 | 113 | 212 | 4 | 14 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_7 | 325 | 0.0217 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00167 | 0.9308 |
| Alpelisib | 180614_BG_04 | 14948 | 0.0252 | 161 | 219 | 6 | 12 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_8 | 380 | 0.0248 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00480 | 0.9391 |
| Alpelisib | 180614_BG_04 | 15509 | 0.0170 | 80 | 185 | 12 | 22 | Alpelisib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_9 | 265 | 0.0168 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00320 | 0.9559 |
| Alpelisib | 180614_BG_02 | 12302 | 0.0143 | 23 | 153 | 5 | 3 | Alpelisib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_1 | 176 | 0.0141 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00589 | 0.8524 |
| Alpelisib | 180614_BG_02 | 12312 | 0.0199 | 56 | 190 | 6 | 5 | Alpelisib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_2 | 246 | 0.0196 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00041 | 0.8528 |
| Alpelisib | 180614_BG_02 | 12914 | 0.0165 | 44 | 170 | 12 | 11 | Alpelisib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_3 | 214 | 0.0163 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00369 | 0.8737 |
| Alpelisib | 180614_BG_03 | 12582 | 0.0207 | 79 | 183 | 4 | 9 | Alpelisib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_4 | 262 | 0.0204 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00040 | 0.8623 |
| Alpelisib | 180614_BG_03 | 12748 | 0.0221 | 76 | 208 | 5 | 13 | Alpelisib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_5 | 284 | 0.0218 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00180 | 0.8680 |