LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Vorinostat | 180703_BG_11 | 2061 | 0.0932 | 159 | 48 | 4 | 19 | Vorinostat | 9.98 | treatment | 72 | 3 | MCF10A-GM_4 | 207 | 0.0913 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.05947 | 0.1051 |
Vorinostat | 180703_BG_11 | 1752 | 0.1601 | 234 | 84 | 5 | 17 | Vorinostat | 9.98 | treatment | 72 | 3 | MCF10A-GM_5 | 318 | 0.1536 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.12182 | 0.0606 |
Vorinostat | 180703_BG_11 | 2149 | 0.1259 | 226 | 73 | 13 | 13 | Vorinostat | 9.98 | treatment | 72 | 3 | MCF10A-GM_6 | 299 | 0.1221 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.09034 | 0.1168 |
Vorinostat | 180703_BG_12 | 1898 | 0.0702 | 82 | 57 | 10 | 4 | Vorinostat | 9.98 | treatment | 72 | 3 | MCF10A-GM_7 | 139 | 0.0682 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.03644 | 0.0823 |
Vorinostat | 180703_BG_12 | 1888 | 0.0901 | 110 | 70 | 11 | 14 | Vorinostat | 9.98 | treatment | 72 | 3 | MCF10A-GM_8 | 180 | 0.0870 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.05524 | 0.0809 |
Vorinostat | 180703_BG_12 | 2107 | 0.0563 | 61 | 61 | 12 | 16 | Vorinostat | 9.98 | treatment | 72 | 3 | MCF10A-GM_9 | 122 | 0.0547 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.02293 | 0.1113 |