LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Etoposide | 180615_MC_07 | 8052 | 0.0165 | 20 | 113 | 11 | 16 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_5 | 133 | 0.0162 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00715 | 0.8123 |
| Etoposide | 180615_MC_07 | 8380 | 0.0143 | 19 | 101 | 11 | 20 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_6 | 120 | 0.0141 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00928 | 0.8288 |
| Etoposide | 180615_MC_08 | 8551 | 0.0202 | 77 | 97 | 3 | 22 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_7 | 174 | 0.0199 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00346 | 0.8372 |
| Etoposide | 180615_MC_08 | 8161 | 0.0239 | 44 | 152 | 11 | 13 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_8 | 196 | 0.0235 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00006 | 0.8179 |
| Etoposide | 180615_MC_08 | 7506 | 0.0235 | 29 | 148 | 11 | 17 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_9 | 177 | 0.0230 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00036 | 0.7837 |
| Etoposide | 180615_MC_06 | 3661 | 0.0483 | 85 | 96 | 8 | 4 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_1 | 181 | 0.0471 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.02371 | 0.5155 |
| Etoposide | 180615_MC_06 | 3466 | 0.0421 | 77 | 72 | 10 | 6 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_2 | 149 | 0.0412 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01782 | 0.4968 |
| Etoposide | 180615_MC_06 | 3469 | 0.0261 | 17 | 74 | 11 | 8 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_3 | 91 | 0.0256 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00216 | 0.4971 |
| Etoposide | 180615_MC_07 | 3692 | 0.0274 | 33 | 69 | 8 | 3 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_4 | 102 | 0.0269 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00349 | 0.5184 |
| Etoposide | 180615_MC_07 | 4105 | 0.0263 | 38 | 71 | 9 | 7 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_5 | 109 | 0.0259 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00247 | 0.5554 |
| Etoposide | 180615_MC_07 | 3980 | 0.0247 | 30 | 69 | 11 | 7 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_6 | 99 | 0.0243 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00087 | 0.5445 |
| Etoposide | 180615_MC_08 | 3546 | 0.0422 | 78 | 75 | 6 | 22 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_7 | 153 | 0.0414 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01796 | 0.5045 |
| Etoposide | 180615_MC_08 | 3550 | 0.0445 | 94 | 68 | 8 | 16 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_8 | 162 | 0.0436 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.02024 | 0.5049 |
| Etoposide | 180615_MC_08 | 4320 | 0.0302 | 51 | 81 | 10 | 11 | Etoposide | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_9 | 132 | 0.0296 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00625 | 0.5735 |
| Etoposide | 180615_MC_06 | 859 | 0.0767 | 41 | 28 | 3 | 6 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_1 | 69 | 0.0744 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05096 | 0.0906 |
| Etoposide | 180615_MC_06 | 841 | 0.0804 | 30 | 40 | 6 | 17 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_2 | 70 | 0.0768 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05344 | 0.0853 |
| Etoposide | 180615_MC_06 | 1003 | 0.0955 | 76 | 27 | 6 | 18 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_3 | 103 | 0.0931 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.06973 | 0.1296 |
| Etoposide | 180615_MC_07 | 1119 | 0.0995 | 57 | 60 | 3 | 8 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_4 | 117 | 0.0947 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07126 | 0.1580 |
| Etoposide | 180615_MC_07 | 971 | 0.0853 | 49 | 38 | 7 | 16 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_5 | 87 | 0.0822 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05883 | 0.1213 |
| Etoposide | 180615_MC_07 | 918 | 0.1770 | 99 | 81 | 8 | 5 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_6 | 180 | 0.1639 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.14054 | 0.1071 |
| Etoposide | 180615_MC_08 | 1029 | 0.0890 | 16 | 77 | 3 | 3 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_7 | 93 | 0.0829 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05949 | 0.1362 |
| Etoposide | 180615_MC_08 | 1102 | 0.1274 | 91 | 61 | 10 | 12 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_8 | 152 | 0.1212 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.09781 | 0.1540 |
| Etoposide | 180615_MC_08 | 1281 | 0.0848 | 52 | 61 | 11 | 9 | Etoposide | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_9 | 113 | 0.0811 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05766 | 0.1941 |
| Etoposide | 180615_MC_06 | 738 | 0.0878 | 48 | 21 | 3 | 4 | Etoposide | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_1 | 69 | 0.0855 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.06210 | 0.0536 |
| Etoposide | 180615_MC_06 | 745 | 0.0645 | 30 | 20 | 4 | 19 | Etoposide | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_2 | 50 | 0.0629 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03949 | 0.0559 |