LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Etoposide | 180615_MC_08 | 11304 | 0.0254 | 38 | 250 | 11 | 4 | Etoposide | 0.003326667 | treatment | 72 | 1 | MCF10A-GM_7 | 288 | 0.0248 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00145 | 0.9574 |
| Etoposide | 180615_MC_08 | 12288 | 0.0258 | 80 | 239 | 11 | 7 | Etoposide | 0.003326667 | treatment | 72 | 1 | MCF10A-GM_8 | 319 | 0.0253 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00191 | 0.9948 |
| Etoposide | 180615_MC_08 | 12363 | 0.0230 | 63 | 223 | 14 | 8 | Etoposide | 0.003326667 | treatment | 72 | 1 | MCF10A-GM_9 | 286 | 0.0226 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00079 | 0.9976 |
| Etoposide | 180615_MC_06 | 11623 | 0.0261 | 47 | 258 | 9 | 5 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_1 | 305 | 0.0256 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00217 | 0.9698 |
| Etoposide | 180615_MC_06 | 11988 | 0.0192 | 22 | 208 | 9 | 17 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_2 | 230 | 0.0188 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00457 | 0.9837 |
| Etoposide | 180615_MC_06 | 10875 | 0.0257 | 38 | 242 | 12 | 20 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_3 | 280 | 0.0251 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00170 | 0.9403 |
| Etoposide | 180615_MC_07 | 11448 | 0.0174 | 59 | 141 | 4 | 3 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_4 | 200 | 0.0172 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00623 | 0.9630 |
| Etoposide | 180615_MC_07 | 12554 | 0.0238 | 79 | 222 | 6 | 14 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_5 | 301 | 0.0234 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00002 | 1.0046 |
| Etoposide | 180615_MC_07 | 12422 | 0.0240 | 77 | 223 | 8 | 14 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_6 | 300 | 0.0236 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00018 | 0.9997 |
| Etoposide | 180615_MC_08 | 11950 | 0.0309 | 98 | 274 | 7 | 6 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_7 | 372 | 0.0302 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00679 | 0.9822 |
| Etoposide | 180615_MC_08 | 11670 | 0.0308 | 70 | 292 | 8 | 6 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_8 | 362 | 0.0301 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00669 | 0.9716 |
| Etoposide | 180615_MC_08 | 12334 | 0.0277 | 86 | 258 | 12 | 17 | Etoposide | 0.00998 | treatment | 72 | 1 | MCF10A-GM_9 | 344 | 0.0271 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00374 | 0.9965 |
| Etoposide | 180615_MC_06 | 10278 | 0.0186 | 41 | 151 | 9 | 12 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_1 | 192 | 0.0183 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00506 | 0.9156 |
| Etoposide | 180615_MC_06 | 11044 | 0.0183 | 17 | 185 | 11 | 21 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_2 | 202 | 0.0180 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00544 | 0.9471 |
| Etoposide | 180615_MC_06 | 11529 | 0.0216 | 27 | 223 | 14 | 9 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_3 | 250 | 0.0212 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00217 | 0.9662 |
| Etoposide | 180615_MC_07 | 10644 | 0.0205 | 58 | 161 | 5 | 9 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_4 | 219 | 0.0202 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00324 | 0.9309 |
| Etoposide | 180615_MC_07 | 11172 | 0.0174 | 47 | 148 | 12 | 7 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_5 | 195 | 0.0172 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00624 | 0.9522 |
| Etoposide | 180615_MC_07 | 11633 | 0.0193 | 50 | 176 | 12 | 11 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_6 | 226 | 0.0191 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00434 | 0.9702 |
| Etoposide | 180615_MC_08 | 10658 | 0.0335 | 126 | 235 | 3 | 12 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_7 | 361 | 0.0328 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00936 | 0.9314 |
| Etoposide | 180615_MC_08 | 11994 | 0.0282 | 81 | 260 | 4 | 10 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_8 | 341 | 0.0276 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00425 | 0.9839 |
| Etoposide | 180615_MC_08 | 11536 | 0.0293 | 83 | 257 | 9 | 14 | Etoposide | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_9 | 340 | 0.0286 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00523 | 0.9664 |
| Etoposide | 180615_MC_06 | 8477 | 0.0155 | 40 | 92 | 7 | 4 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_1 | 132 | 0.0153 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00807 | 0.8336 |
| Etoposide | 180615_MC_06 | 8404 | 0.0180 | 39 | 113 | 9 | 13 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_2 | 152 | 0.0178 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00563 | 0.8300 |
| Etoposide | 180615_MC_06 | 7562 | 0.0203 | 24 | 130 | 14 | 17 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_3 | 154 | 0.0200 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00344 | 0.7867 |
| Etoposide | 180615_MC_07 | 7665 | 0.0156 | 22 | 98 | 7 | 14 | Etoposide | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_4 | 120 | 0.0154 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00798 | 0.7922 |