LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Palbociclib | 180615_MC_07 | 5078 | 0.0155 | 30 | 49 | 11 | 5 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_5 | 79 | 0.0153 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00808 | 0.6323 |
| Palbociclib | 180615_MC_07 | 5238 | 0.0289 | 84 | 70 | 12 | 16 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_6 | 154 | 0.0286 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00516 | 0.6438 |
| Palbociclib | 180615_MC_08 | 4235 | 0.0359 | 78 | 77 | 3 | 6 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_7 | 155 | 0.0353 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01191 | 0.5664 |
| Palbociclib | 180615_MC_08 | 4287 | 0.0392 | 73 | 98 | 3 | 7 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_8 | 171 | 0.0384 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01496 | 0.5708 |
| Palbociclib | 180615_MC_08 | 6344 | 0.0283 | 56 | 125 | 13 | 10 | Palbociclib | 0.332666627 | treatment | 72 | 1 | MCF10A-GM_9 | 181 | 0.0277 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00434 | 0.7169 |
| Palbociclib | 180615_MC_06 | 3371 | 0.0226 | 31 | 46 | 7 | 13 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_1 | 77 | 0.0223 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00107 | 0.4874 |
| Palbociclib | 180615_MC_06 | 3678 | 0.0206 | 20 | 56 | 9 | 15 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_2 | 76 | 0.0202 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00315 | 0.5171 |
| Palbociclib | 180615_MC_06 | 3776 | 0.0168 | 26 | 38 | 12 | 13 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_3 | 64 | 0.0167 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00673 | 0.5262 |
| Palbociclib | 180615_MC_07 | 3452 | 0.0368 | 76 | 54 | 6 | 6 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_4 | 130 | 0.0363 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01289 | 0.4954 |
| Palbociclib | 180615_MC_07 | 3607 | 0.0293 | 51 | 56 | 6 | 9 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_5 | 107 | 0.0288 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00541 | 0.5104 |
| Palbociclib | 180615_MC_07 | 4384 | 0.0193 | 23 | 62 | 11 | 19 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_6 | 85 | 0.0190 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00438 | 0.5788 |
| Palbociclib | 180615_MC_08 | 3906 | 0.0383 | 87 | 66 | 6 | 14 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_7 | 153 | 0.0377 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01430 | 0.5379 |
| Palbociclib | 180615_MC_08 | 3929 | 0.0223 | 10 | 78 | 13 | 3 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_8 | 88 | 0.0219 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00149 | 0.5400 |
| Palbociclib | 180615_MC_08 | 4173 | 0.0258 | 53 | 56 | 14 | 6 | Palbociclib | 0.997999609 | treatment | 72 | 1 | MCF10A-GM_9 | 109 | 0.0255 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00206 | 0.5612 |
| Palbociclib | 180615_MC_06 | 1090 | 0.0837 | 57 | 39 | 9 | 6 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_1 | 96 | 0.0809 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05755 | 0.1511 |
| Palbociclib | 180615_MC_06 | 1288 | 0.0613 | 50 | 32 | 9 | 10 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_2 | 82 | 0.0599 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03646 | 0.1956 |
| Palbociclib | 180615_MC_06 | 1358 | 0.0377 | 23 | 29 | 10 | 9 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_3 | 52 | 0.0369 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01348 | 0.2100 |
| Palbociclib | 180615_MC_07 | 1180 | 0.0965 | 84 | 38 | 3 | 20 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_4 | 122 | 0.0937 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07030 | 0.1721 |
| Palbociclib | 180615_MC_07 | 1301 | 0.0610 | 43 | 39 | 3 | 21 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_5 | 82 | 0.0593 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03589 | 0.1983 |
| Palbociclib | 180615_MC_07 | 1348 | 0.0933 | 88 | 46 | 4 | 10 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_6 | 134 | 0.0904 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.06702 | 0.2080 |
| Palbociclib | 180615_MC_08 | 1465 | 0.0718 | 81 | 30 | 6 | 17 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_7 | 111 | 0.0704 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.04703 | 0.2310 |
| Palbociclib | 180615_MC_08 | 1417 | 0.0512 | 47 | 28 | 7 | 20 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_8 | 75 | 0.0503 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.02687 | 0.2218 |
| Palbociclib | 180615_MC_08 | 1817 | 0.0615 | 70 | 46 | 12 | 10 | Palbociclib | 10.01326667 | treatment | 72 | 1 | MCF10A-GM_9 | 116 | 0.0600 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03661 | 0.2927 |
| Palbociclib | 180615_MC_06 | 1790 | 0.0292 | 26 | 27 | 4 | 5 | Palbociclib | 3.160329361 | treatment | 72 | 1 | MCF10A-GM_1 | 53 | 0.0288 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00536 | 0.2883 |
| Palbociclib | 180615_MC_06 | 1843 | 0.0274 | 19 | 32 | 6 | 15 | Palbociclib | 3.160329361 | treatment | 72 | 1 | MCF10A-GM_2 | 51 | 0.0269 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00353 | 0.2969 |