LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Taxol | 180622_MC_16 | 1855 | 0.5897 | 475 | 899 | 14 | 20 | Paclitaxel | 0.00998 | treatment | 72 | 3 | MCF10A-GM_9 | 1374 | 0.4255 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.40145 | 0.1043 |
| Taxol | 180622_MC_14 | 531 | 1.0613 | 530 | 596 | 3 | 19 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_1 | 1126 | 0.6795 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.65547 | -0.1947 |
| Taxol | 180622_MC_14 | 521 | 1.0464 | 362 | 562 | 11 | 7 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_2 | 924 | 0.6394 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.61538 | -0.1985 |
| Taxol | 180622_MC_14 | 560 | 1.0054 | 369 | 565 | 12 | 16 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_3 | 934 | 0.6252 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.60110 | -0.1838 |
| Taxol | 180622_MC_15 | 498 | 0.9633 | 402 | 465 | 4 | 16 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_4 | 867 | 0.6352 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.61110 | -0.2076 |
| Taxol | 180622_MC_15 | 635 | 1.0046 | 445 | 640 | 9 | 10 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_5 | 1085 | 0.6308 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.60675 | -0.1575 |
| Taxol | 180622_MC_15 | 737 | 0.8935 | 352 | 621 | 10 | 14 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_6 | 973 | 0.5690 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.54494 | -0.1252 |
| Taxol | 180622_MC_16 | 659 | 0.8653 | 269 | 534 | 4 | 20 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_7 | 803 | 0.5492 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.52518 | -0.1496 |
| Taxol | 180622_MC_16 | 634 | 1.0138 | 524 | 650 | 7 | 8 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_8 | 1174 | 0.6493 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.62527 | -0.1578 |
| Taxol | 180622_MC_16 | 677 | 0.9713 | 473 | 644 | 11 | 18 | Paclitaxel | 0.031603332 | treatment | 72 | 3 | MCF10A-GM_9 | 1117 | 0.6226 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.59856 | -0.1438 |
| Taxol | 180622_MC_14 | 396 | 1.0108 | 255 | 403 | 4 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_1 | 658 | 0.6243 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.60022 | -0.2522 |
| Taxol | 180622_MC_14 | 395 | 1.1140 | 544 | 502 | 5 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_2 | 1046 | 0.7259 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.70182 | -0.2526 |
| Taxol | 180622_MC_14 | 434 | 1.0210 | 327 | 450 | 6 | 7 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_3 | 777 | 0.6416 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.61755 | -0.2347 |
| Taxol | 180622_MC_15 | 435 | 1.1421 | 515 | 570 | 10 | 22 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_4 | 1085 | 0.7138 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.68975 | -0.2342 |
| Taxol | 180622_MC_15 | 378 | 1.1610 | 417 | 506 | 11 | 17 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_5 | 923 | 0.7095 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.68539 | -0.2609 |
| Taxol | 180622_MC_15 | 440 | 1.1407 | 477 | 569 | 14 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_6 | 1046 | 0.7039 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.67984 | -0.2320 |
| Taxol | 180622_MC_16 | 506 | 0.9132 | 300 | 436 | 3 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_7 | 736 | 0.5926 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.56852 | -0.2044 |
| Taxol | 180622_MC_16 | 414 | 1.1294 | 413 | 521 | 9 | 13 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_8 | 934 | 0.6929 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.66881 | -0.2437 |
| Taxol | 180622_MC_16 | 416 | 1.1289 | 391 | 520 | 14 | 5 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_9 | 911 | 0.6865 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.66244 | -0.2428 |
| Taxol | 180622_MC_14 | 387 | 1.0330 | 402 | 413 | 4 | 18 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_1 | 815 | 0.6780 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.65397 | -0.2565 |
| Taxol | 180622_MC_14 | 463 | 1.0436 | 454 | 503 | 7 | 19 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_2 | 957 | 0.6739 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.64988 | -0.2221 |
| Taxol | 180622_MC_14 | 371 | 1.1369 | 535 | 495 | 8 | 3 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_3 | 1030 | 0.7352 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.71112 | -0.2644 |
| Taxol | 180622_MC_15 | 442 | 1.0164 | 473 | 457 | 4 | 12 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_4 | 930 | 0.6778 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.65377 | -0.2311 |
| Taxol | 180622_MC_15 | 421 | 1.1051 | 397 | 507 | 11 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_5 | 904 | 0.6823 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.65820 | -0.2405 |
| Taxol | 180622_MC_15 | 439 | 1.0787 | 527 | 515 | 13 | 9 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_6 | 1042 | 0.7036 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.67951 | -0.2324 |