LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Etoposide | 180622_MC_15 | 16531 | 0.0332 | 76 | 475 | 10 | 20 | Etoposide | 0.003326667 | treatment | 72 | 3 | MCF10A-GM_5 | 551 | 0.0323 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00819 | 0.9182 |
| Etoposide | 180622_MC_15 | 18639 | 0.0196 | 43 | 323 | 12 | 18 | Etoposide | 0.003326667 | treatment | 72 | 3 | MCF10A-GM_6 | 366 | 0.0193 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00481 | 0.9772 |
| Etoposide | 180622_MC_16 | 18593 | 0.0322 | 154 | 450 | 11 | 4 | Etoposide | 0.003326667 | treatment | 72 | 3 | MCF10A-GM_7 | 604 | 0.0315 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00740 | 0.9760 |
| Etoposide | 180622_MC_16 | 19067 | 0.0308 | 144 | 447 | 11 | 7 | Etoposide | 0.003326667 | treatment | 72 | 3 | MCF10A-GM_8 | 591 | 0.0301 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00600 | 0.9886 |
| Etoposide | 180622_MC_16 | 18711 | 0.0220 | 73 | 341 | 14 | 8 | Etoposide | 0.003326667 | treatment | 72 | 3 | MCF10A-GM_9 | 414 | 0.0216 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00242 | 0.9791 |
| Etoposide | 180622_MC_14 | 18685 | 0.0253 | 78 | 397 | 9 | 5 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_1 | 475 | 0.0248 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00072 | 0.9784 |
| Etoposide | 180622_MC_14 | 18925 | 0.0242 | 70 | 389 | 9 | 17 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_2 | 459 | 0.0237 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00039 | 0.9848 |
| Etoposide | 180622_MC_14 | 19107 | 0.0213 | 36 | 372 | 12 | 20 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_3 | 408 | 0.0209 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00316 | 0.9896 |
| Etoposide | 180622_MC_15 | 17915 | 0.0242 | 51 | 384 | 4 | 3 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_4 | 435 | 0.0237 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00036 | 0.9575 |
| Etoposide | 180622_MC_15 | 18114 | 0.0167 | 59 | 244 | 6 | 14 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_5 | 303 | 0.0165 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00762 | 0.9630 |
| Etoposide | 180622_MC_15 | 18536 | 0.0230 | 64 | 363 | 8 | 14 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_6 | 427 | 0.0225 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00155 | 0.9744 |
| Etoposide | 180622_MC_16 | 19055 | 0.0302 | 125 | 455 | 7 | 6 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_7 | 580 | 0.0295 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00547 | 0.9882 |
| Etoposide | 180622_MC_16 | 19227 | 0.0286 | 106 | 447 | 8 | 6 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_8 | 553 | 0.0280 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00389 | 0.9928 |
| Etoposide | 180622_MC_16 | 18185 | 0.0178 | 82 | 243 | 12 | 17 | Etoposide | 0.00998 | treatment | 72 | 3 | MCF10A-GM_9 | 325 | 0.0176 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00651 | 0.9649 |
| Etoposide | 180622_MC_14 | 16737 | 0.0185 | 53 | 258 | 9 | 12 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_1 | 311 | 0.0182 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00583 | 0.9242 |
| Etoposide | 180622_MC_14 | 17043 | 0.0169 | 46 | 243 | 11 | 21 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_2 | 289 | 0.0167 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00739 | 0.9330 |
| Etoposide | 180622_MC_14 | 16894 | 0.0178 | 46 | 256 | 14 | 9 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_3 | 302 | 0.0176 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00651 | 0.9287 |
| Etoposide | 180622_MC_15 | 16763 | 0.0190 | 64 | 256 | 5 | 9 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_4 | 320 | 0.0187 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00534 | 0.9250 |
| Etoposide | 180622_MC_15 | 16490 | 0.0169 | 51 | 228 | 12 | 7 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_5 | 279 | 0.0166 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00743 | 0.9170 |
| Etoposide | 180622_MC_15 | 16930 | 0.0171 | 49 | 241 | 12 | 11 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_6 | 290 | 0.0168 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00723 | 0.9298 |
| Etoposide | 180622_MC_16 | 17266 | 0.0216 | 123 | 252 | 3 | 12 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_7 | 375 | 0.0213 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00281 | 0.9394 |
| Etoposide | 180622_MC_16 | 17432 | 0.0222 | 71 | 318 | 4 | 10 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_8 | 389 | 0.0218 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00224 | 0.9441 |
| Etoposide | 180622_MC_16 | 17714 | 0.0238 | 113 | 312 | 9 | 14 | Etoposide | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_9 | 425 | 0.0234 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00064 | 0.9520 |
| Etoposide | 180622_MC_14 | 10952 | 0.0191 | 67 | 143 | 7 | 4 | Etoposide | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_1 | 210 | 0.0188 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00525 | 0.7289 |
| Etoposide | 180622_MC_14 | 11332 | 0.0201 | 69 | 160 | 9 | 13 | Etoposide | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_2 | 229 | 0.0198 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00426 | 0.7438 |