LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Vorinostat | 180619_MC_10 | 13670 | 0.0187 | 31 | 225 | 14 | 6 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_3 | 256 | 0.0184 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00469 | 0.9577 |
Vorinostat | 180619_MC_11 | 13472 | 0.0193 | 53 | 208 | 4 | 4 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_4 | 261 | 0.0190 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00407 | 0.9515 |
Vorinostat | 180619_MC_11 | 15002 | 0.0249 | 87 | 289 | 7 | 8 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_5 | 376 | 0.0245 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00138 | 0.9980 |
Vorinostat | 180619_MC_11 | 14141 | 0.0245 | 84 | 265 | 9 | 21 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_6 | 349 | 0.0241 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00101 | 0.9723 |
Vorinostat | 180619_MC_12 | 15047 | 0.0263 | 110 | 288 | 5 | 12 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_7 | 398 | 0.0258 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00269 | 0.9993 |
Vorinostat | 180619_MC_12 | 14369 | 0.0268 | 130 | 259 | 7 | 17 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_8 | 389 | 0.0264 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00328 | 0.9792 |
Vorinostat | 180619_MC_12 | 15251 | 0.0260 | 94 | 305 | 13 | 18 | Vorinostat | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_9 | 399 | 0.0255 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00242 | 1.0052 |
Vorinostat | 180619_MC_10 | 12946 | 0.0198 | 37 | 220 | 4 | 8 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_1 | 257 | 0.0195 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00361 | 0.9345 |
Vorinostat | 180619_MC_10 | 12754 | 0.0198 | 52 | 202 | 10 | 10 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_2 | 254 | 0.0195 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00355 | 0.9282 |
Vorinostat | 180619_MC_10 | 11653 | 0.0253 | 65 | 231 | 13 | 11 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_3 | 296 | 0.0248 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00170 | 0.8905 |
Vorinostat | 180619_MC_11 | 12482 | 0.0238 | 66 | 233 | 4 | 14 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_4 | 299 | 0.0234 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00032 | 0.9191 |
Vorinostat | 180619_MC_11 | 13085 | 0.0212 | 48 | 230 | 9 | 18 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_5 | 278 | 0.0208 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00227 | 0.9391 |
Vorinostat | 180619_MC_11 | 12505 | 0.0205 | 55 | 203 | 10 | 15 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_6 | 258 | 0.0202 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00286 | 0.9199 |
Vorinostat | 180619_MC_12 | 12921 | 0.0264 | 121 | 223 | 3 | 16 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_7 | 344 | 0.0259 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00286 | 0.9337 |
Vorinostat | 180619_MC_12 | 13126 | 0.0296 | 119 | 273 | 5 | 9 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_8 | 392 | 0.0290 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00592 | 0.9404 |
Vorinostat | 180619_MC_12 | 13584 | 0.0241 | 95 | 235 | 10 | 6 | Vorinostat | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_9 | 330 | 0.0237 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00064 | 0.9550 |
Vorinostat | 180619_MC_10 | 8256 | 0.0239 | 69 | 130 | 6 | 21 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_1 | 199 | 0.0235 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00046 | 0.7531 |
Vorinostat | 180619_MC_10 | 6547 | 0.0231 | 78 | 75 | 7 | 9 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_2 | 153 | 0.0228 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00024 | 0.6663 |
Vorinostat | 180619_MC_10 | 8482 | 0.0185 | 44 | 114 | 13 | 16 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_3 | 158 | 0.0183 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00479 | 0.7635 |
Vorinostat | 180619_MC_11 | 8442 | 0.0250 | 47 | 165 | 3 | 5 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_4 | 212 | 0.0245 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00142 | 0.7616 |
Vorinostat | 180619_MC_11 | 9522 | 0.0249 | 55 | 183 | 10 | 7 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_5 | 238 | 0.0244 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00131 | 0.8087 |
Vorinostat | 180619_MC_11 | 9640 | 0.0272 | 90 | 175 | 11 | 3 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_6 | 265 | 0.0268 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00368 | 0.8136 |
Vorinostat | 180619_MC_12 | 10577 | 0.0354 | 144 | 235 | 3 | 4 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_7 | 379 | 0.0346 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.01152 | 0.8508 |
Vorinostat | 180619_MC_12 | 10494 | 0.0209 | 68 | 153 | 6 | 15 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_8 | 221 | 0.0206 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | -0.00245 | 0.8476 |
Vorinostat | 180619_MC_12 | 10773 | 0.0236 | 95 | 161 | 12 | 15 | Vorinostat | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_9 | 256 | 0.0232 | 635.9 | 71.1 | 15071 | 356.7 | 0.0231 | 0.00014 | 0.8582 |