Growth rate-corrected (GR) dose-response metrics across a panel of 71 breast cancer cell lines treated with a library of small molecule and antibody perturbagens. Dataset 1 of 4: Relative cell counts and normalized growth rate inhibition values across technical replicates. - Dataset (ID:20268)
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Cell | Clinical Subtype | Transcriptional Subtype | Small Molecule | Antibody | Perturbagen Target | Perturbagen Class | Perturbagen Concentration | Perturbagen Conc Unit | Biological Replicate ID | Relative Cell Count | Normalized Growth Rate Inhibition Value | Nominal Division Rate |
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MCF 10F | NM | - | Methotrexate | DHFR | Metabolism | 0.107 | uM | 7487.084 | 0.6311 | 0.4184 | 1.3396 | |
MCF 10F | NM | - | Methotrexate | DHFR | Metabolism | 0.533 | uM | 7487.084 | 0.5546 | 0.2879 | 1.3396 | |
MCF 10F | NM | - | Methotrexate | DHFR | Metabolism | 2.67 | uM | 7487.084 | 0.5770 | 0.3266 | 1.3396 | |
MCF 10F | NM | - | Methotrexate | DHFR | Metabolism | 13.3 | uM | 7487.084 | 0.5781 | 0.3285 | 1.3396 | |
MCF 10F | NM | - | Methotrexate | DHFR | Metabolism | 66.7 | uM | 7487.084 | 0.5581 | 0.2941 | 1.3396 | |
MCF 10F | NM | - | Methotrexate | DHFR | Metabolism | 333 | uM | 7487.084 | 0.5471 | 0.2750 | 1.3396 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.000853 | uM | 7489.084 | 0.9928 | 0.9929 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.00427 | uM | 7489.084 | 0.9509 | 0.9510 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.0213 | uM | 7489.084 | 1.0265 | 1.0260 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.107 | uM | 7489.084 | 0.7762 | 0.7651 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.533 | uM | 7489.084 | 0.7884 | 0.7787 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 2.67 | uM | 7489.084 | 0.8270 | 0.8211 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 13.3 | uM | 7489.084 | 0.8078 | 0.8002 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 66.7 | uM | 7489.084 | 0.7119 | 0.6914 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 333 | uM | 7489.084 | 0.7474 | 0.7325 | 2.0279 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.000853 | uM | 7490.085 | 0.9857 | 0.9889 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.00427 | uM | 7490.085 | 0.9175 | 0.9343 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.0213 | uM | 7490.085 | 0.9647 | 0.9723 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.107 | uM | 7490.085 | 0.5859 | 0.6254 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 0.533 | uM | 7490.085 | 0.4709 | 0.4933 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 2.67 | uM | 7490.085 | 0.3801 | 0.3742 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 13.3 | uM | 7490.085 | 0.3756 | 0.3678 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 66.7 | uM | 7490.085 | 0.3687 | 0.3581 | 2.5778 | |
MCF12A | NM | Basal B | Methotrexate | DHFR | Metabolism | 333 | uM | 7490.085 | 0.3977 | 0.3986 | 2.5778 | |
MCF7 | HR+ | Luminal | Methotrexate | DHFR | Metabolism | 0.000853 | uM | 7492.084 | 1.0875 | 1.1162 | 1.4850 |