LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)

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Small Molecule barcode cell_count frac_dead corpse_count cell_count_dead row column agent concentration role timepoint replicate cell_line dead_count fraction_dead cell_count__time0 dead_count__time0 cell_count__ctrl dead_count__ctrl fraction_dead__ctrl increase_fraction_dead GRvalue
Taxol
180703_BG_12
 21795 0.0300 66 590 10 20
Paclitaxel
0.000332667
treatment
 72 3
MCF10A-GM_8
 656 0.0292 1387.8 74.9 21564 711.9 0.0318 -0.00258 1.0054
Taxol
180703_BG_12
 21742 0.0360 65 719 13 20
Paclitaxel
0.000332667
treatment
 72 3
MCF10A-GM_9
 784 0.0348 1387.8 74.9 21564 711.9 0.0318 0.00301 1.0041
Taxol
180703_BG_10
 21515 0.0291 81 547 3 16
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_1
 628 0.0284 1387.8 74.9 21564 711.9 0.0318 -0.00344 0.9988
Taxol
180703_BG_10
 21239 0.0271 50 527 12 7
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_2
 577 0.0264 1387.8 74.9 21564 711.9 0.0318 -0.00535 0.9923
Taxol
180703_BG_10
 20272 0.0261 78 453 14 5
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_3
 531 0.0255 1387.8 74.9 21564 711.9 0.0318 -0.00627 0.9690
Taxol
180703_BG_11
 21575 0.0404 103 773 10 5
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_4
 876 0.0390 1387.8 74.9 21564 711.9 0.0318 0.00722 1.0002
Taxol
180703_BG_11
 21649 0.0350 101 661 12 4
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_5
 762 0.0340 1387.8 74.9 21564 711.9 0.0318 0.00220 1.0020
Taxol
180703_BG_11
 21655 0.0461 225 784 13 12
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_6
 1009 0.0445 1387.8 74.9 21564 711.9 0.0318 0.01272 1.0021
Taxol
180703_BG_12
 21723 0.0357 68 710 10 15
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_7
 778 0.0346 1387.8 74.9 21564 711.9 0.0318 0.00278 1.0037
Taxol
180703_BG_12
 21672 0.0255 62 493 10 18
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_8
 555 0.0250 1387.8 74.9 21564 711.9 0.0318 -0.00683 1.0025
Taxol
180703_BG_12
 21246 0.0277 42 547 12 12
Paclitaxel
0.000998
treatment
 72 3
MCF10A-GM_9
 589 0.0270 1387.8 74.9 21564 711.9 0.0318 -0.00482 0.9925
Taxol
180703_BG_10
 7939 0.1506 373 879 5 21
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_1
 1252 0.1362 1387.8 74.9 21564 711.9 0.0318 0.10442 0.5537
Taxol
180703_BG_10
 7458 0.1455 296 832 7 16
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_2
 1128 0.1314 1387.8 74.9 21564 711.9 0.0318 0.09958 0.5294
Taxol
180703_BG_10
 8562 0.1216 259 814 7 22
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_3
 1073 0.1114 1387.8 74.9 21564 711.9 0.0318 0.07957 0.5837
Taxol
180703_BG_11
 10048 0.1286 377 964 9 9
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_4
 1341 0.1177 1387.8 74.9 21564 711.9 0.0318 0.08595 0.6490
Taxol
180703_BG_11
 10101 0.0981 217 795 12 12
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_5
 1012 0.0911 1387.8 74.9 21564 711.9 0.0318 0.05927 0.6512
Taxol
180703_BG_11
 10196 0.1030 310 772 14 6
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_6
 1082 0.0959 1387.8 74.9 21564 711.9 0.0318 0.06414 0.6551
Taxol
180703_BG_12
 14178 0.0695 243 759 5 15
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_7
 1002 0.0660 1387.8 74.9 21564 711.9 0.0318 0.03421 0.7989
Taxol
180703_BG_12
 12987 0.0657 159 705 8 8
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_8
 864 0.0624 1387.8 74.9 21564 711.9 0.0318 0.03058 0.7595
Taxol
180703_BG_12
 14512 0.0674 247 748 13 11
Paclitaxel
0.002994
treatment
 72 3
MCF10A-GM_9
 995 0.0642 1387.8 74.9 21564 711.9 0.0318 0.03237 0.8095
Taxol
180703_BG_10
 2069 0.6300 493 1121 3 9
Paclitaxel
0.00998
treatment
 72 3
MCF10A-GM_1
 1614 0.4382 1387.8 74.9 21564 711.9 0.0318 0.40643 0.1062
Taxol
180703_BG_10
 1845 0.5696 290 926 4 16
Paclitaxel
0.00998
treatment
 72 3
MCF10A-GM_2
 1216 0.3973 1387.8 74.9 21564 711.9 0.0318 0.36546 0.0746
Taxol
180703_BG_10
 1898 0.5739 287 967 4 20
Paclitaxel
0.00998
treatment
 72 3
MCF10A-GM_3
 1254 0.3978 1387.8 74.9 21564 711.9 0.0318 0.36604 0.0823
Taxol
180703_BG_11
 1739 0.7248 677 1074 5 16
Paclitaxel
0.00998
treatment
 72 3
MCF10A-GM_4
 1751 0.5017 1387.8 74.9 21564 711.9 0.0318 0.46992 0.0587
Taxol
180703_BG_11
 2233 0.5700 467 1072 11 11
Paclitaxel
0.00998
treatment
 72 3
MCF10A-GM_5
 1539 0.4080 1387.8 74.9 21564 711.9 0.0318 0.37621 0.1277