LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)

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Small Molecule barcode cell_count frac_dead corpse_count cell_count_dead row column agent concentration role timepoint replicate cell_line dead_count fraction_dead cell_count__time0 dead_count__time0 cell_count__ctrl dead_count__ctrl fraction_dead__ctrl increase_fraction_dead GRvalue
Etoposide
180622_BG_6
850 0.1701 132 35 4 19
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_2
167 0.1642 832.0 168.3 20016 537.9 0.0261 0.13808 0.0047
Etoposide
180622_BG_6
906 0.1609 113 51 8 20
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_3
164 0.1533 832.0 168.3 20016 537.9 0.0261 0.12715 0.0187
Etoposide
180622_BG_7
878 0.1488 90 54 6 8
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_4
144 0.1409 832.0 168.3 20016 537.9 0.0261 0.11478 0.0118
Etoposide
180622_BG_7
751 0.1729 76 67 14 4
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_5
143 0.1600 832.0 168.3 20016 537.9 0.0261 0.13383 -0.0221
Etoposide
180622_BG_7
952 0.1386 80 63 14 17
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_6
143 0.1306 832.0 168.3 20016 537.9 0.0261 0.10447 0.0298
Etoposide
180622_BG_8
784 0.1895 92 74 4 3
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_7
166 0.1747 832.0 168.3 20016 537.9 0.0261 0.14861 -0.0129
Etoposide
180622_BG_8
803 0.1612 84 59 8 10
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_8
143 0.1512 832.0 168.3 20016 537.9 0.0261 0.12504 -0.0077
Etoposide
180622_BG_8
749 0.1814 78 72 12 4
Etoposide
3.193598006
treatment
72 2
MCF10A-GM_9
150 0.1669 832.0 168.3 20016 537.9 0.0261 0.14073 -0.0226
Etoposide
180622_BG_6
813 0.1957 153 36 4 15
Etoposide
9.98
treatment
72 2
MCF10A-GM_1
189 0.1886 832.0 168.3 20016 537.9 0.0261 0.16250 -0.0050
Etoposide
180622_BG_6
559 0.2760 162 37 6 22
Etoposide
9.98
treatment
72 2
MCF10A-GM_2
199 0.2625 832.0 168.3 20016 537.9 0.0261 0.23641 -0.0830
Etoposide
180622_BG_6
905 0.1403 93 47 10 7
Etoposide
9.98
treatment
72 2
MCF10A-GM_3
140 0.1340 832.0 168.3 20016 537.9 0.0261 0.10785 0.0185
Etoposide
180622_BG_7
875 0.1501 91 54 4 13
Etoposide
9.98
treatment
72 2
MCF10A-GM_4
145 0.1422 832.0 168.3 20016 537.9 0.0261 0.11603 0.0110
Etoposide
180622_BG_7
931 0.1708 129 52 7 17
Etoposide
9.98
treatment
72 2
MCF10A-GM_5
181 0.1628 832.0 168.3 20016 537.9 0.0261 0.13664 0.0248
Etoposide
180622_BG_7
896 0.1452 82 60 14 16
Etoposide
9.98
treatment
72 2
MCF10A-GM_6
142 0.1368 832.0 168.3 20016 537.9 0.0261 0.11068 0.0163
Etoposide
180622_BG_8
959 0.1466 71 80 9 8
Etoposide
9.98
treatment
72 2
MCF10A-GM_7
151 0.1360 832.0 168.3 20016 537.9 0.0261 0.10991 0.0314
Etoposide
180622_BG_8
859 0.1684 127 39 13 7
Etoposide
9.98
treatment
72 2
MCF10A-GM_8
166 0.1620 832.0 168.3 20016 537.9 0.0261 0.13583 0.0070
Etoposide
180622_BG_8
866 0.1589 84 67 13 12
Etoposide
9.98
treatment
72 2
MCF10A-GM_9
151 0.1485 832.0 168.3 20016 537.9 0.0261 0.12235 0.0088
Neratinib
180622_BG_6
20626 0.0316 100 554 3 13
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_1
654 0.0307 832.0 168.3 20016 537.9 0.0261 0.00461 1.0131
Neratinib
180622_BG_6
19446 0.0287 120 442 8 22
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_2
562 0.0281 832.0 168.3 20016 537.9 0.0261 0.00196 0.9874
Neratinib
180622_BG_6
20545 0.0246 100 407 11 17
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_3
507 0.0241 832.0 168.3 20016 537.9 0.0261 -0.00204 1.0114
Neratinib
180622_BG_7
20452 0.0276 54 511 3 17
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_4
565 0.0269 832.0 168.3 20016 537.9 0.0261 0.00076 1.0094
Neratinib
180622_BG_7
20877 0.0241 47 458 14 10
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_5
505 0.0236 832.0 168.3 20016 537.9 0.0261 -0.00251 1.0184
Neratinib
180622_BG_7
20361 0.0242 52 441 14 11
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_6
493 0.0236 832.0 168.3 20016 537.9 0.0261 -0.00248 1.0075
Neratinib
180622_BG_8
20652 0.0309 54 586 4 5
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_7
640 0.0301 832.0 168.3 20016 537.9 0.0261 0.00393 1.0137
Neratinib
180622_BG_8
21170 0.0268 56 513 11 22
Neratinib
0.001081167
treatment
72 2
MCF10A-GM_8
569 0.0262 832.0 168.3 20016 537.9 0.0261 0.00005 1.0246