LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vorinostat | 180615_MC_06 | 4638 | 0.0214 | 41 | 59 | 7 | 10 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_2 | 100 | 0.0211 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00229 | 0.5991 |
| Vorinostat | 180615_MC_06 | 4801 | 0.0286 | 55 | 84 | 8 | 8 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_3 | 139 | 0.0281 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00474 | 0.6117 |
| Vorinostat | 180615_MC_07 | 5022 | 0.0313 | 84 | 76 | 6 | 20 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_4 | 160 | 0.0309 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00748 | 0.6282 |
| Vorinostat | 180615_MC_07 | 5150 | 0.0229 | 54 | 65 | 12 | 17 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_5 | 119 | 0.0226 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00081 | 0.6375 |
| Vorinostat | 180615_MC_07 | 5080 | 0.0247 | 57 | 70 | 14 | 21 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_6 | 127 | 0.0244 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00099 | 0.6324 |
| Vorinostat | 180615_MC_08 | 5668 | 0.0310 | 75 | 103 | 3 | 9 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_7 | 178 | 0.0304 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00705 | 0.6735 |
| Vorinostat | 180615_MC_08 | 4257 | 0.0345 | 56 | 93 | 6 | 18 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_8 | 149 | 0.0338 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01042 | 0.5683 |
| Vorinostat | 180615_MC_08 | 4999 | 0.0214 | 42 | 66 | 10 | 8 | Vorinostat | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_9 | 108 | 0.0211 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00225 | 0.6265 |
| Vorinostat | 180615_MC_06 | 1445 | 0.0803 | 75 | 47 | 6 | 20 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_1 | 122 | 0.0779 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05446 | 0.2272 |
| Vorinostat | 180615_MC_06 | 1547 | 0.0403 | 17 | 46 | 7 | 8 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_2 | 63 | 0.0391 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01573 | 0.2464 |
| Vorinostat | 180615_MC_06 | 1434 | 0.0411 | 25 | 35 | 11 | 12 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_3 | 60 | 0.0402 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01676 | 0.2251 |
| Vorinostat | 180615_MC_07 | 1787 | 0.0593 | 33 | 75 | 7 | 13 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_4 | 108 | 0.0570 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03359 | 0.2878 |
| Vorinostat | 180615_MC_07 | 1677 | 0.0445 | 32 | 44 | 9 | 11 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_5 | 76 | 0.0434 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01996 | 0.2694 |
| Vorinostat | 180615_MC_07 | 1737 | 0.0598 | 68 | 40 | 12 | 10 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_6 | 108 | 0.0585 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03514 | 0.2796 |
| Vorinostat | 180615_MC_08 | 1546 | 0.0663 | 69 | 38 | 6 | 6 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_7 | 107 | 0.0647 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.04133 | 0.2462 |
| Vorinostat | 180615_MC_08 | 1519 | 0.0408 | 26 | 37 | 9 | 17 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_8 | 63 | 0.0398 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01642 | 0.2412 |
| Vorinostat | 180615_MC_08 | 1739 | 0.0468 | 54 | 30 | 10 | 17 | Vorinostat | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_9 | 84 | 0.0461 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.02268 | 0.2799 |
| Vorinostat | 180615_MC_06 | 639 | 0.1831 | 82 | 50 | 10 | 16 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_1 | 132 | 0.1712 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.14781 | 0.0197 |
| Vorinostat | 180615_MC_06 | 667 | 0.1211 | 35 | 50 | 11 | 5 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_2 | 85 | 0.1130 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.08963 | 0.0297 |
| Vorinostat | 180615_MC_06 | 778 | 0.0963 | 32 | 46 | 13 | 5 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_3 | 78 | 0.0911 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.06772 | 0.0663 |
| Vorinostat | 180615_MC_07 | 703 | 0.2415 | 150 | 56 | 4 | 19 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_4 | 206 | 0.2266 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.20322 | 0.0421 |
| Vorinostat | 180615_MC_07 | 801 | 0.1062 | 37 | 52 | 5 | 17 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_5 | 89 | 0.1000 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07660 | 0.0734 |
| Vorinostat | 180615_MC_07 | 836 | 0.1330 | 36 | 80 | 13 | 13 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_6 | 116 | 0.1218 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.09845 | 0.0839 |
| Vorinostat | 180615_MC_08 | 814 | 0.1384 | 82 | 42 | 10 | 4 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_7 | 124 | 0.1322 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.10880 | 0.0773 |
| Vorinostat | 180615_MC_08 | 877 | 0.1201 | 72 | 42 | 11 | 14 | Vorinostat | 9.98 | treatment | 72 | 1 | MCF10A-GM_8 | 114 | 0.1150 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.09164 | 0.0957 |