LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Dasatinib | 180622_BG_7 | 4842 | 0.0888 | 55 | 380 | 6 | 12 | Dasatinib | 0.997999808 | treatment | 72 | 2 | MCF10A-GM_4 | 435 | 0.0824 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.05631 | 0.4679 |
Dasatinib | 180622_BG_6 | 1508 | 0.1889 | 59 | 237 | 7 | 20 | Dasatinib | 3.193598006 | treatment | 72 | 2 | MCF10A-GM_1 | 296 | 0.1641 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.13795 | 0.1384 |
Dasatinib | 180622_BG_6 | 7246 | 0.0416 | 80 | 225 | 12 | 12 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_3 | 305 | 0.0404 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.01427 | 0.6027 |
Dasatinib | 180614_BG_03 | 10091 | 0.0267 | 101 | 171 | 3 | 16 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_4 | 272 | 0.0262 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00625 | 0.7683 |
Dasatinib | 180622_BG_7 | 6174 | 0.0518 | 58 | 265 | 4 | 20 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_4 | 323 | 0.0497 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.02359 | 0.5478 |
Dasatinib | 180614_BG_02 | 11130 | 0.0178 | 29 | 170 | 6 | 16 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_3 | 199 | 0.0176 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00243 | 0.8094 |
Dasatinib | 180622_BG_6 | 6772 | 0.0457 | 80 | 233 | 10 | 20 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_2 | 313 | 0.0442 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.01805 | 0.5793 |
Dasatinib | 180622_BG_7 | 6610 | 0.0386 | 76 | 182 | 9 | 17 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_5 | 258 | 0.0376 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.01144 | 0.5709 |
Dasatinib | 180622_BG_8 | 12297 | 0.0276 | 72 | 269 | 6 | 3 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_8 | 341 | 0.0270 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.00086 | 0.7985 |
Dasatinib | 180622_BG_8 | 12636 | 0.0247 | 69 | 245 | 12 | 8 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_9 | 314 | 0.0242 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | -0.00188 | 0.8092 |
Dasatinib | 180614_BG_02 | 10928 | 0.0258 | 77 | 207 | 6 | 6 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_2 | 284 | 0.0253 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00533 | 0.8017 |
Dasatinib | 180614_BG_02 | 9659 | 0.0255 | 27 | 220 | 5 | 17 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_1 | 247 | 0.0249 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00494 | 0.7502 |
Dasatinib | 180622_BG_6 | 6759 | 0.0481 | 85 | 244 | 8 | 14 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_1 | 329 | 0.0464 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.02029 | 0.5786 |
Dasatinib | 180622_BG_7 | 6185 | 0.0461 | 47 | 240 | 12 | 9 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_6 | 287 | 0.0443 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.01822 | 0.5484 |
Dasatinib | 180622_BG_7 | 10819 | 0.0343 | 100 | 275 | 5 | 11 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_5 | 375 | 0.0335 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.00738 | 0.7490 |
Dasatinib | 180622_BG_7 | 10869 | 0.0262 | 58 | 228 | 10 | 6 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_6 | 286 | 0.0256 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | -0.00049 | 0.7508 |
Dasatinib | 180614_BG_04 | 15301 | 0.0242 | 179 | 195 | 3 | 17 | Dasatinib | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_8 | 374 | 0.0239 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00386 | 0.9497 |
Dasatinib | 180614_BG_04 | 15338 | 0.0274 | 168 | 257 | 3 | 8 | Dasatinib | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_7 | 425 | 0.0270 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00697 | 0.9508 |
Dasatinib | 180614_BG_04 | 16850 | 0.0209 | 128 | 226 | 9 | 9 | Dasatinib | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_9 | 354 | 0.0206 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.00058 | 0.9944 |
Dasatinib | 180614_BG_03 | 14695 | 0.0177 | 72 | 189 | 8 | 18 | Dasatinib | 0.033266667 | treatment | 72 | 1 | MCF10A-GM_6 | 261 | 0.0175 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | -0.00254 | 0.9313 |
Dasatinib | 180622_BG_8 | 11523 | 0.0321 | 90 | 283 | 4 | 4 | Dasatinib | 0.099799999 | treatment | 72 | 2 | MCF10A-GM_7 | 373 | 0.0314 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.00523 | 0.7732 |
Dasatinib | 180622_BG_8 | 6893 | 0.0610 | 91 | 335 | 3 | 5 | Dasatinib | 0.316033316 | treatment | 72 | 2 | MCF10A-GM_7 | 426 | 0.0582 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.03208 | 0.5854 |
Dasatinib | 180622_BG_6 | 1778 | 0.1612 | 65 | 232 | 12 | 3 | Dasatinib | 3.193598006 | treatment | 72 | 2 | MCF10A-GM_2 | 297 | 0.1431 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.11701 | 0.1800 |
Dasatinib | 180622_BG_6 | 1758 | 0.1826 | 109 | 232 | 13 | 9 | Dasatinib | 3.193598006 | treatment | 72 | 2 | MCF10A-GM_3 | 341 | 0.1625 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.13633 | 0.1771 |
Dasatinib | 180622_BG_8 | 16635 | 0.0302 | 61 | 443 | 3 | 8 | Dasatinib | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_7 | 504 | 0.0294 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.00328 | 0.9210 |