LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Taxol | 180703_BG_12 | 689 | 0.9814 | 385 | 669 | 9 | 13 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_8 | 1054 | 0.6047 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.57291 | -0.1622 |
| Taxol | 180622_BG_8 | 370 | 1.1082 | 268 | 439 | 7 | 8 | Paclitaxel | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_8 | 707 | 0.6565 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.63033 | -0.1619 |
| Taxol | 180703_BG_11 | 692 | 0.8920 | 410 | 573 | 4 | 12 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_4 | 983 | 0.5869 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.55507 | -0.1612 |
| Taxol | 180703_BG_10 | 695 | 0.8881 | 288 | 585 | 5 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_2 | 873 | 0.5568 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.52496 | -0.1603 |
| Taxol | 180703_BG_10 | 696 | 0.8672 | 283 | 566 | 4 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_1 | 849 | 0.5495 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.51772 | -0.1600 |
| Taxol | 180703_BG_11 | 701 | 0.9199 | 523 | 603 | 13 | 9 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_6 | 1126 | 0.6163 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.58451 | -0.1585 |
| Taxol | 180614_BG_03 | 428 | 1.0167 | 291 | 440 | 11 | 17 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_5 | 731 | 0.6307 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.61072 | -0.1576 |
| Taxol | 180622_BG_7 | 379 | 1.0603 | 251 | 417 | 14 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_6 | 668 | 0.6380 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.61189 | -0.1575 |
| Taxol | 180614_BG_03 | 429 | 1.0726 | 287 | 481 | 10 | 22 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_4 | 768 | 0.6416 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.62161 | -0.1571 |
| Taxol | 180703_BG_11 | 707 | 0.8357 | 358 | 532 | 14 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_6 | 890 | 0.5573 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.52550 | -0.1567 |
| Taxol | 180614_BG_02 | 431 | 0.9606 | 254 | 404 | 4 | 18 | Paclitaxel | 0.312706472 | treatment | 72 | 1 | MCF10A-GM_1 | 658 | 0.6042 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.58423 | -0.1562 |
| Taxol | 180614_BG_04 | 434 | 0.8690 | 253 | 344 | 14 | 5 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_8 | 597 | 0.5790 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.55905 | -0.1548 |
| Taxol | 180622_BG_8 | 385 | 1.0697 | 375 | 438 | 4 | 20 | Paclitaxel | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_7 | 813 | 0.6786 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.65251 | -0.1546 |
| Taxol | 180622_BG_6 | 387 | 0.9568 | 307 | 357 | 11 | 7 | Paclitaxel | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_2 | 664 | 0.6318 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.60565 | -0.1536 |
| Taxol | 180622_BG_6 | 388 | 0.9269 | 282 | 339 | 4 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 2 | MCF10A-GM_1 | 621 | 0.6155 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.58934 | -0.1532 |
| Taxol | 180622_BG_7 | 390 | 1.0835 | 245 | 443 | 9 | 10 | Paclitaxel | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_5 | 688 | 0.6382 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.61209 | -0.1522 |
| Taxol | 180703_BG_10 | 722 | 0.8184 | 181 | 558 | 6 | 7 | Paclitaxel | 0.099799981 | treatment | 72 | 3 | MCF10A-GM_3 | 739 | 0.5058 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.47402 | -0.1522 |
| Taxol | 180703_BG_12 | 735 | 0.9470 | 360 | 677 | 7 | 21 | Paclitaxel | 0.312706472 | treatment | 72 | 3 | MCF10A-GM_7 | 1037 | 0.5852 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | 0.55342 | -0.1484 |
| Taxol | 180622_BG_7 | 400 | 0.9489 | 304 | 364 | 4 | 16 | Paclitaxel | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_4 | 668 | 0.6255 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.59934 | -0.1475 |
| Taxol | 180614_BG_04 | 454 | 0.7472 | 175 | 295 | 14 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 1 | MCF10A-GM_8 | 470 | 0.5087 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.48866 | -0.1459 |
| Taxol | 180614_BG_04 | 455 | 0.9558 | 360 | 419 | 9 | 13 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_7 | 779 | 0.6313 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.61128 | -0.1454 |
| Taxol | 180614_BG_02 | 456 | 0.9386 | 212 | 415 | 4 | 14 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_1 | 627 | 0.5789 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.55895 | -0.1450 |
| Taxol | 180622_BG_6 | 406 | 0.9806 | 368 | 391 | 3 | 19 | Paclitaxel | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_1 | 759 | 0.6515 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.62538 | -0.1448 |
| Taxol | 180614_BG_03 | 457 | 0.9960 | 301 | 454 | 14 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_6 | 755 | 0.6229 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.60294 | -0.1445 |
| Taxol | 180614_BG_04 | 457 | 0.9737 | 378 | 435 | 3 | 20 | Paclitaxel | 0.099799981 | treatment | 72 | 1 | MCF10A-GM_6 | 813 | 0.6402 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.62016 | -0.1445 |