LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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| Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vorinostat | 180622_MC_16 | 19960 | 0.0310 | 108 | 515 | 7 | 17 | Vorinostat | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_8 | 623 | 0.0303 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00620 | 1.0117 |
| Vorinostat | 180622_MC_16 | 18783 | 0.0250 | 82 | 389 | 13 | 18 | Vorinostat | 0.033266667 | treatment | 72 | 3 | MCF10A-GM_9 | 471 | 0.0245 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00039 | 0.9810 |
| Vorinostat | 180622_MC_14 | 18270 | 0.0272 | 42 | 456 | 4 | 8 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_1 | 498 | 0.0265 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00247 | 0.9672 |
| Vorinostat | 180622_MC_14 | 17855 | 0.0218 | 30 | 359 | 10 | 10 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_2 | 389 | 0.0213 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00275 | 0.9559 |
| Vorinostat | 180622_MC_14 | 17836 | 0.0239 | 50 | 377 | 13 | 11 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_3 | 427 | 0.0234 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00069 | 0.9553 |
| Vorinostat | 180622_MC_15 | 18071 | 0.0198 | 45 | 313 | 4 | 14 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_4 | 358 | 0.0194 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00464 | 0.9618 |
| Vorinostat | 180622_MC_15 | 18140 | 0.0236 | 90 | 340 | 9 | 18 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_5 | 430 | 0.0232 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00091 | 0.9637 |
| Vorinostat | 180622_MC_15 | 17599 | 0.0208 | 74 | 293 | 10 | 15 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_6 | 367 | 0.0204 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00364 | 0.9488 |
| Vorinostat | 180622_MC_16 | 19115 | 0.0270 | 98 | 421 | 3 | 16 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_7 | 519 | 0.0264 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00237 | 0.9898 |
| Vorinostat | 180622_MC_16 | 18632 | 0.0295 | 116 | 438 | 5 | 9 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_8 | 554 | 0.0289 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00481 | 0.9770 |
| Vorinostat | 180622_MC_16 | 19027 | 0.0261 | 76 | 423 | 10 | 6 | Vorinostat | 0.099799999 | treatment | 72 | 3 | MCF10A-GM_9 | 499 | 0.0256 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00149 | 0.9875 |
| Vorinostat | 180622_MC_14 | 15251 | 0.0207 | 40 | 277 | 6 | 21 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_1 | 317 | 0.0204 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00371 | 0.8796 |
| Vorinostat | 180622_MC_14 | 14473 | 0.0215 | 53 | 259 | 7 | 9 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_2 | 312 | 0.0211 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00297 | 0.8549 |
| Vorinostat | 180622_MC_14 | 14372 | 0.0209 | 35 | 266 | 13 | 16 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_3 | 301 | 0.0205 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00355 | 0.8516 |
| Vorinostat | 180622_MC_15 | 15485 | 0.0237 | 73 | 296 | 3 | 5 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_4 | 369 | 0.0233 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00079 | 0.8868 |
| Vorinostat | 180622_MC_15 | 15900 | 0.0188 | 77 | 224 | 10 | 7 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_5 | 301 | 0.0186 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00549 | 0.8994 |
| Vorinostat | 180622_MC_15 | 15176 | 0.0206 | 63 | 251 | 11 | 3 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_6 | 314 | 0.0203 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00380 | 0.8772 |
| Vorinostat | 180622_MC_16 | 16246 | 0.0362 | 157 | 437 | 3 | 4 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_7 | 594 | 0.0353 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.01121 | 0.9098 |
| Vorinostat | 180622_MC_16 | 15489 | 0.0259 | 79 | 324 | 6 | 15 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_8 | 403 | 0.0254 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00129 | 0.8869 |
| Vorinostat | 180622_MC_16 | 16916 | 0.0246 | 67 | 351 | 12 | 15 | Vorinostat | 0.316033316 | treatment | 72 | 3 | MCF10A-GM_9 | 418 | 0.0241 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00005 | 0.9294 |
| Vorinostat | 180622_MC_14 | 8274 | 0.0294 | 86 | 160 | 5 | 5 | Vorinostat | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_1 | 246 | 0.0289 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00481 | 0.6107 |
| Vorinostat | 180622_MC_14 | 8066 | 0.0208 | 65 | 104 | 7 | 10 | Vorinostat | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_2 | 169 | 0.0205 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00355 | 0.6004 |
| Vorinostat | 180622_MC_14 | 8297 | 0.0248 | 75 | 133 | 8 | 8 | Vorinostat | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_3 | 208 | 0.0245 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | 0.00039 | 0.6118 |
| Vorinostat | 180622_MC_15 | 9356 | 0.0242 | 78 | 150 | 6 | 20 | Vorinostat | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_4 | 228 | 0.0238 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00028 | 0.6615 |
| Vorinostat | 180622_MC_15 | 9621 | 0.0228 | 57 | 164 | 12 | 17 | Vorinostat | 0.997999808 | treatment | 72 | 3 | MCF10A-GM_5 | 221 | 0.0225 | 1252.0 | 97.6 | 19505 | 481.8 | 0.0241 | -0.00161 | 0.6732 |