LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist A in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20358)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Dasatinib | 180615_MC_06 | 7103 | 0.0301 | 65 | 151 | 6 | 6 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_2 | 216 | 0.0295 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00611 | 0.7615 |
Dasatinib | 180615_MC_06 | 7635 | 0.0345 | 80 | 186 | 6 | 16 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_3 | 266 | 0.0337 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01027 | 0.7906 |
Dasatinib | 180615_MC_07 | 8319 | 0.0219 | 34 | 149 | 3 | 16 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_4 | 183 | 0.0215 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | -0.00187 | 0.8258 |
Dasatinib | 180615_MC_07 | 8852 | 0.0246 | 34 | 185 | 5 | 11 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_5 | 219 | 0.0241 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00074 | 0.8517 |
Dasatinib | 180615_MC_07 | 7759 | 0.0361 | 99 | 185 | 10 | 6 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_6 | 284 | 0.0353 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01191 | 0.7972 |
Dasatinib | 180615_MC_08 | 9328 | 0.0280 | 81 | 182 | 4 | 4 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_7 | 263 | 0.0274 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00402 | 0.8739 |
Dasatinib | 180615_MC_08 | 8740 | 0.0292 | 61 | 196 | 6 | 3 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_8 | 257 | 0.0286 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00517 | 0.8464 |
Dasatinib | 180615_MC_08 | 8665 | 0.0280 | 47 | 197 | 12 | 8 | Dasatinib | 0.099799999 | treatment | 72 | 1 | MCF10A-GM_9 | 244 | 0.0274 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.00399 | 0.8428 |
Dasatinib | 180615_MC_06 | 2279 | 0.0656 | 55 | 98 | 8 | 14 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_1 | 153 | 0.0629 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03951 | 0.3609 |
Dasatinib | 180615_MC_06 | 2304 | 0.0572 | 38 | 96 | 10 | 20 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_2 | 134 | 0.0550 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03156 | 0.3643 |
Dasatinib | 180615_MC_06 | 2952 | 0.0511 | 40 | 113 | 12 | 12 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_3 | 153 | 0.0493 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.02588 | 0.4432 |
Dasatinib | 180615_MC_07 | 2572 | 0.0784 | 106 | 104 | 4 | 20 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_4 | 210 | 0.0755 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.05209 | 0.3988 |
Dasatinib | 180615_MC_07 | 2585 | 0.0429 | 25 | 87 | 9 | 17 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_5 | 112 | 0.0415 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.01813 | 0.4004 |
Dasatinib | 180615_MC_07 | 2699 | 0.0594 | 47 | 116 | 12 | 9 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_6 | 163 | 0.0570 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03356 | 0.4142 |
Dasatinib | 180615_MC_08 | 3083 | 0.0560 | 25 | 149 | 3 | 5 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_7 | 174 | 0.0534 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03003 | 0.4575 |
Dasatinib | 180615_MC_08 | 3011 | 0.0500 | 10 | 141 | 7 | 4 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_8 | 151 | 0.0478 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.02436 | 0.4497 |
Dasatinib | 180615_MC_08 | 3456 | 0.0611 | 64 | 151 | 14 | 17 | Dasatinib | 0.316033316 | treatment | 72 | 1 | MCF10A-GM_9 | 215 | 0.0586 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03517 | 0.4958 |
Dasatinib | 180615_MC_06 | 1241 | 0.1074 | 35 | 102 | 3 | 22 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_1 | 137 | 0.0994 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07602 | 0.1855 |
Dasatinib | 180615_MC_06 | 2005 | 0.1060 | 89 | 133 | 4 | 12 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_2 | 222 | 0.0997 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07629 | 0.3219 |
Dasatinib | 180615_MC_06 | 1704 | 0.0595 | 9 | 93 | 11 | 3 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_3 | 102 | 0.0565 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.03308 | 0.2740 |
Dasatinib | 180615_MC_07 | 1639 | 0.1183 | 60 | 141 | 6 | 12 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_4 | 201 | 0.1092 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.08584 | 0.2628 |
Dasatinib | 180615_MC_07 | 1236 | 0.1110 | 43 | 99 | 7 | 11 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_5 | 142 | 0.1030 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07965 | 0.1845 |
Dasatinib | 180615_MC_07 | 1865 | 0.0922 | 44 | 132 | 12 | 13 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_6 | 176 | 0.0862 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.06283 | 0.3004 |
Dasatinib | 180615_MC_08 | 1494 | 0.1026 | 46 | 112 | 8 | 19 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_7 | 158 | 0.0956 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.07224 | 0.2365 |
Dasatinib | 180615_MC_08 | 1489 | 0.1162 | 25 | 151 | 9 | 4 | Dasatinib | 0.997999808 | treatment | 72 | 1 | MCF10A-GM_8 | 176 | 0.1057 | 586.3 | 196.0 | 12428 | 298.5 | 0.0234 | 0.08231 | 0.2356 |