Phosphorylation state and protein levels measured in BRAF(V600E/D) melanoma cell lines monitored by Reverse Phase Protein Arrays (RPPA) - Dataset - HMS LINCS Database

Phosphorylation state and protein levels measured in BRAF(V600E/D) melanoma cell lines monitored by Reverse Phase Protein Arrays (RPPA) - Dataset (ID:20218)

August 25, 2015: The data file for this dataset was updated to include additional DMSO control data that were inadvertently omitted from the original version. The Assay Protocol description of how experimental data were normalized to DMSO control data also was clarified (point 9).

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Small Molecule	Cell Line	Drug Concentration	Conc Unit	Time Point	Time Point Unit	Replicate	Scanner/Software	pMEK(S217/221)	Normalized Median pMEK(S217/221)	pERK(T202/Y204)	Normalized Median pERK(T202/Y204)	p-p90RSK(S380)	Normalized Median p-p90RSK(S380)	p-p90RSK(T573)	Normalized Median p-p90RSK(T573)	p-AKT(T308)	Normalized Median p-AKT(T308)	p-AKT(S473)	Normalized Median p-AKT(S473)	p-mTOR(S2448)	Normalized Median p-mTOR(S2448)	p-p70S6K(T421/S424)	Normalized Median p-p70S6K(T421/S424)	p-p70S6K(T389)	Normalized Median p-p70S6K(T389)	p-S6(S235/236)	Normalized Median p-S6(S235/236)	p-AMPK(T172)	Normalized Median p-AMPK(T172)	p-JNK(T183/Y185)	Normalized Median p-JNK(T183/Y185)	Total c-Jun	Normalized Median Total c-Jun	p-cJun(S63)	Normalized Median p-cJun(S63)	p-P38(T180/Y182)	Normalized Median p-P38(T180/Y182)	p-HSP27(S82)	Normalized Median p-HSP27(S82)	p-NFKB(S536)	Normalized Median p-NFKB(S536)	Bim	Normalized Median Bim	cPARP	Normalized Median cPARP	p-Histone H3(S10)	Normalized Median p-Histone H3(S10)	p27 Kip1	Normalized Median p27 Kip1
Vemurafenib	COLO 858	0.3160	uM	24	hr	7	InnoScan/Mapix	0.0222	-1.2492	0.2976	-0.8874	0.0038	-0.1874	0.0040	0.1878	0.0116	0.3392	0.0070	-0.5018	0.0089	0.0659	0.0162	-0.0127	0.0374	-0.4385	0.1887	-1.2598	0.1087	0.8858	0.0040	0.3045	0.0258	0.2986	0.0134	0.6195	0.0261	0.1911	0.0076	0.3186	0.0872	0.1249	0.0424	1.4640	0.0130	0.6324	0.1799	0.7288	0.0512	1.5737
Vemurafenib	COLO 858	0.3160	uM	24	hr	8	InnoScan/Mapix	0.0228	-1.2492	0.4739	-0.8874	0.0035	-0.1874	0.0042	0.1878	0.0117	0.3392	0.0077	-0.5018		0.0659	0.0158	-0.0127	0.0444	-0.4385	0.1905	-1.2598	0.1106	0.8858	0.0050	0.3045	0.0264	0.2986	0.0119	0.6195	0.0363	0.1911	0.0068	0.3186	0.0943	0.1249	0.0415	1.4640	0.0128	0.6324	0.2577	0.7288		1.5737
Vemurafenib	COLO 858	0.3160	uM	48	hr	1	InnoScan/Mapix	0.0193	-1.0937	0.1042	-1.4553	0.0042	0.0164	0.0027	-0.2650	0.0081	0.4593	0.0067	0.4333	0.0089	0.3519	0.0113	-0.1159	0.0683	0.0476	0.0851	-1.4162	0.0404	-0.8036	0.0032	0.4665	0.0156	0.1915	0.0112	0.4456	0.0122	-0.3707	0.0080	0.1745	0.0341	0.0377	0.0114	0.6129	0.0064	0.3120	0.0261	-1.0159	0.0311	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	2	InnoScan/Mapix	0.0204	-1.0937	0.1484	-1.4553		0.0164	0.0027	-0.2650	0.0064	0.4593	0.0086	0.4333	0.0105	0.3519	0.0110	-0.1159	0.0642	0.0476	0.1121	-1.4162	0.0358	-0.8036	0.0032	0.4665	0.0186	0.1915	0.0102	0.4456	0.0153	-0.3707	0.0071	0.1745	0.0406	0.0377	0.0088	0.6129	0.0053	0.3120	0.0388	-1.0159	0.0346	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	3	InnoScan/Mapix	0.0284	-1.0937	0.1650	-1.4553	0.0042	0.0164	0.0030	-0.2650	0.0137	0.4593	0.0096	0.4333	0.0113	0.3519	0.0158	-0.1159	0.0517	0.0476	0.1280	-1.4162	0.0336	-0.8036	0.0042	0.4665	0.0188	0.1915	0.0109	0.4456	0.0163	-0.3707	0.0062	0.1745	0.0554	0.0377	0.0211	0.6129	0.0086	0.3120	0.0400	-1.0159	0.0642	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	4	InnoScan/Mapix	0.0290	-1.0937	0.2538	-1.4553	0.0046	0.0164	0.0037	-0.2650	0.0123	0.4593	0.0169	0.4333	0.0131	0.3519	0.0189	-0.1159	0.1048	0.0476	0.1451	-1.4162	0.0351	-0.8036	0.0049	0.4665	0.0214	0.1915	0.0102	0.4456	0.0268	-0.3707	0.0078	0.1745	0.0677	0.0377	0.0179	0.6129	0.0090	0.3120	0.0553	-1.0159	0.0727	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	5	InnoScan/Mapix	0.0174	-1.0937	0.1266	-1.4553	0.0043	0.0164	0.0027	-0.2650	0.0080	0.4593	0.0070	0.4333	0.0137	0.3519	0.0145	-0.1159	0.1016	0.0476	0.1399	-1.4162	0.0416	-0.8036	0.0045	0.4665	0.0164	0.1915	0.0102	0.4456	0.0126	-0.3707	0.0077	0.1745	0.0469	0.0377	0.0135	0.6129	0.0082	0.3120	0.0335	-1.0159	0.0342	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	6	InnoScan/Mapix	0.0176	-1.0937	0.2141	-1.4553	0.0038	0.0164	0.0044	-0.2650	0.0072	0.4593	0.0121	0.4333	0.0113	0.3519	0.0124	-0.1159	0.0713	0.0476	0.1553	-1.4162	0.0384	-0.8036	0.0052	0.4665	0.0199	0.1915	0.0103	0.4456	0.0176	-0.3707	0.0068	0.1745	0.0681	0.0377	0.0106	0.6129	0.0075	0.3120	0.0504	-1.0159	0.0414	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	7	InnoScan/Mapix	0.0263	-1.0937	0.2959	-1.4553	0.0038	0.0164	0.0027	-0.2650	0.0117	0.4593	0.0115	0.4333	0.0115	0.3519	0.0138	-0.1159	0.0518	0.0476	0.1678	-1.4162	0.0320	-0.8036	0.0036	0.4665	0.0291	0.1915	0.0143	0.4456	0.0251	-0.3707	0.0056	0.1745	0.0784	0.0377	0.0201	0.6129	0.0120	0.3120	0.0545	-1.0159	0.0507	1.4356
Vemurafenib	COLO 858	0.3160	uM	48	hr	8	InnoScan/Mapix	0.0262	-1.0937		-1.4553	0.0046	0.0164	0.0034	-0.2650	0.0134	0.4593	0.0126	0.4333	0.0137	0.3519	0.0200	-0.1159	0.0621	0.0476	0.1786	-1.4162	0.0318	-0.8036	0.0047	0.4665	0.0306	0.1915	0.0140	0.4456	0.0350	-0.3707	0.0066	0.1745	0.0871	0.0377	0.0187	0.6129	0.0135	0.3120	0.0742	-1.0159	0.0552	1.4356
Vemurafenib	COLO 858	1.0000	uM	1	hr	1	InnoScan/Mapix	0.0128	-2.0120	0.0364	-3.5250	0.0033	-0.4069		-0.1215		-0.0514	0.0085	0.1436	0.0089	-0.1522	0.0154	-0.3584	0.0570	-0.1059	0.1198	-1.3219	0.0563	-0.1770	0.0039	-0.0015	0.0167	-0.0001	0.0090	0.0340	0.0117	-1.0019		0.2073	0.0244	-0.6742	0.0087	-0.2890	0.0057	-0.0385	0.0300	-0.6070	0.0200	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	2	InnoScan/Mapix	0.0148	-2.0120	0.0448	-3.5250	0.0034	-0.4069	0.0029	-0.1215	0.0080	-0.0514	0.0090	0.1436	0.0081	-0.1522	0.0118	-0.3584	0.0531	-0.1059	0.1372	-1.3219	0.0533	-0.1770	0.0031	-0.0015	0.0184	-0.0001	0.0076	0.0340	0.0120	-1.0019	0.0062	0.2073	0.0247	-0.6742	0.0086	-0.2890	0.0044	-0.0385	0.0537	-0.6070	0.0138	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	3	InnoScan/Mapix	0.0123	-2.0120	0.0358	-3.5250	0.0032	-0.4069	0.0035	-0.1215	0.0066	-0.0514		0.1436	0.0075	-0.1522	0.0132	-0.3584	0.0588	-0.1059	0.1786	-1.3219	0.0415	-0.1770	0.0035	-0.0015	0.0126	-0.0001	0.0077	0.0340	0.0071	-1.0019	0.0077	0.2073	0.0434	-0.6742	0.0083	-0.2890	0.0075	-0.0385	0.0633	-0.6070	0.0334	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	4	InnoScan/Mapix	0.0123	-2.0120	0.0305	-3.5250	0.0028	-0.4069	0.0033	-0.1215	0.0071	-0.0514	0.0086	0.1436	0.0080	-0.1522	0.0122	-0.3584	0.0533	-0.1059	0.1508	-1.3219	0.0459	-0.1770	0.0031	-0.0015	0.0124	-0.0001	0.0070	0.0340	0.0102	-1.0019	0.0065	0.2073	0.0476	-0.6742	0.0078	-0.2890	0.0084	-0.0385	0.0815	-0.6070	0.0462	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	5	InnoScan/Mapix	0.0113	-2.0120	0.0343	-3.5250	0.0037	-0.4069	0.0037	-0.1215	0.0068	-0.0514	0.0086	0.1436	0.0069	-0.1522	0.0139	-0.3584	0.0709	-0.1059	0.1534	-1.3219	0.0513	-0.1770	0.0030	-0.0015	0.0160	-0.0001	0.0086	0.0340	0.0123	-1.0019	0.0071	0.2073	0.0230	-0.6742	0.0079	-0.2890	0.0058	-0.0385	0.0340	-0.6070	0.0166	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	6	InnoScan/Mapix	0.0122	-2.0120	0.0424	-3.5250	0.0029	-0.4069	0.0031	-0.1215	0.0066	-0.0514	0.0094	0.1436	0.0066	-0.1522	0.0107	-0.3584	0.0779	-0.1059	0.1321	-1.3219	0.0577	-0.1770	0.0031	-0.0015	0.0173	-0.0001	0.0080	0.0340	0.0153	-1.0019	0.0074	0.2073	0.0322	-0.6742	0.0067	-0.2890	0.0056	-0.0385	0.0561	-0.6070	0.0148	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	7	InnoScan/Mapix	0.0097	-2.0120	0.0448	-3.5250	0.0028	-0.4069	0.0032	-0.1215	0.0068	-0.0514	0.0079	0.1436	0.0082	-0.1522	0.0101	-0.3584	0.0923	-0.1059	0.2695	-1.3219	0.0574	-0.1770	0.0032	-0.0015	0.0173	-0.0001	0.0088	0.0340	0.0083	-1.0019	0.0076	0.2073	0.0511	-0.6742	0.0084	-0.2890	0.0094	-0.0385	0.0832	-0.6070	0.0226	0.3293
Vemurafenib	COLO 858	1.0000	uM	1	hr	8	InnoScan/Mapix	0.0105	-2.0120	0.0466	-3.5250	0.0031	-0.4069	0.0030	-0.1215	0.0070	-0.0514	0.0091	0.1436	0.0094	-0.1522	0.0104	-0.3584	0.0603	-0.1059	0.2433	-1.3219	0.0569	-0.1770	0.0035	-0.0015	0.0172	-0.0001	0.0079	0.0340	0.0087	-1.0019	0.0051	0.2073	0.0562	-0.6742	0.0095	-0.2890	0.0094	-0.0385	0.1070	-0.6070	0.0253	0.3293
Vemurafenib	COLO 858	1.0000	uM	5	hr	1	InnoScan/Mapix	0.0070	-2.5690	0.0792	-1.8818	0.0030	-0.3877	0.0050	0.3506	0.0096	1.1008	0.0105	1.3633	0.0066	-0.1273	0.0118	-0.1102	0.0436	-0.7052	0.0927	-1.6726	0.0427	-0.6264	0.0034	0.1699	0.0105	-0.6342	0.0076	-0.1399	0.0140	-0.5128	0.0060	-0.1340	0.0342	-0.1326	0.0118	1.0629	0.0093	0.2423	0.0392	-0.0642	0.0199	0.2652
Vemurafenib	COLO 858	1.0000	uM	5	hr	2	InnoScan/Mapix	0.0074	-2.5690	0.1238	-1.8818	0.0026	-0.3877	0.0029	0.3506	0.0080	1.1008	0.0130	1.3633	0.0060	-0.1273	0.0090	-0.1102	0.0362	-0.7052	0.1211	-1.6726	0.0355	-0.6264	0.0027	0.1699	0.0114	-0.6342	0.0071	-0.1399	0.0187	-0.5128	0.0051	-0.1340	0.0536	-0.1326	0.0099	1.0629	0.0062	0.2423	0.0889	-0.0642	0.0135	0.2652
Vemurafenib	COLO 858	1.0000	uM	5	hr	3	InnoScan/Mapix	0.0094	-2.5690	0.1460	-1.8818	0.0033	-0.3877	0.0056	0.3506	0.0184	1.1008	0.0221	1.3633	0.0091	-0.1273	0.0173	-0.1102	0.0322	-0.7052	0.2208	-1.6726	0.0337	-0.6264	0.0045	0.1699	0.0119	-0.6342	0.0082	-0.1399	0.0180	-0.5128	0.0069	-0.1340	0.0623	-0.1326	0.0255	1.0629	0.0128	0.2423	0.1088	-0.0642	0.0224	0.2652
Vemurafenib	COLO 858	1.0000	uM	5	hr	4	InnoScan/Mapix	0.0084	-2.5690	0.1616	-1.8818	0.0027	-0.3877	0.0040	0.3506	0.0180	1.1008	0.0271	1.3633	0.0092	-0.1273	0.0164	-0.1102	0.0403	-0.7052	0.1972	-1.6726	0.0325	-0.6264	0.0036	0.1699	0.0113	-0.6342	0.0070	-0.1399	0.0233	-0.5128	0.0052	-0.1340	0.0699	-0.1326	0.0261	1.0629	0.0134	0.2423	0.1421	-0.0642	0.0208	0.2652
Vemurafenib	COLO 858	1.0000	uM	5	hr	5	InnoScan/Mapix	0.0082	-2.5690	0.0670	-1.8818	0.0032	-0.3877	0.0038	0.3506	0.0129	1.1008	0.0155	1.3633	0.0072	-0.1273	0.0123	-0.1102	0.0353	-0.7052	0.0957	-1.6726	0.0412	-0.6264	0.0032	0.1699	0.0079	-0.6342	0.0062	-0.1399	0.0102	-0.5128	0.0044	-0.1340	0.0287	-0.1326	0.0177	1.0629	0.0070	0.2423	0.0414	-0.0642	0.0162	0.2652
Vemurafenib	COLO 858	1.0000	uM	5	hr	6	InnoScan/Mapix	0.0076	-2.5690	0.0916	-1.8818		-0.3877	0.0030	0.3506	0.0115	1.1008	0.0183	1.3633	0.0074	-0.1273	0.0099	-0.1102		-0.7052	0.0875	-1.6726	0.0413	-0.6264	0.0026	0.1699	0.0079	-0.6342	0.0052	-0.1399	0.0124	-0.5128	0.0050	-0.1340	0.0371	-0.1326	0.0154	1.0629	0.0070	0.2423	0.0667	-0.0642	0.0145	0.2652
Vemurafenib	COLO 858	1.0000	uM	5	hr	7	InnoScan/Mapix	0.0106	-2.5690	0.1218	-1.8818	0.0036	-0.3877	0.0051	0.3506	0.0206	1.1008	0.0268	1.3633	0.0101	-0.1273	0.0185	-0.1102	0.0405	-0.7052	0.1381	-1.6726	0.0408	-0.6264	0.0041	0.1699	0.0107	-0.6342	0.0069	-0.1399	0.0146	-0.5128	0.0077	-0.1340	0.0566	-0.1326	0.0352	1.0629	0.0082	0.2423	0.0847	-0.0642	0.0227	0.2652

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HMS LINCS Project

Phosphorylation state and protein levels measured in BRAF(V600E/D) melanoma cell lines monitored by Reverse Phase Protein Arrays (RPPA) - Dataset (ID:20218)