LINCS MCF 10A Common Project: Fixed-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Repeat performed by Scientist B in 2019 to assess reproducibility. Dataset 1 of 2: Normalized growth rate inhibition values. - Dataset (ID:20359)
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Small Molecule | barcode | cell_count | frac_dead | corpse_count | cell_count_dead | row | column | agent | concentration | role | timepoint | replicate | cell_line | dead_count | fraction_dead | cell_count__time0 | dead_count__time0 | cell_count__ctrl | dead_count__ctrl | fraction_dead__ctrl | increase_fraction_dead | GRvalue |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Trametinib | 180703_BG_11 | 19676 | 0.0252 | 142 | 357 | 14 | 19 | Trametinib | 0.000332667 | treatment | 72 | 3 | MCF10A-GM_6 | 499 | 0.0247 | 1387.8 | 74.9 | 21564 | 711.9 | 0.0318 | -0.00707 | 0.9542 |
Etoposide | 180622_BG_7 | 751 | 0.1729 | 76 | 67 | 14 | 4 | Etoposide | 3.193598006 | treatment | 72 | 2 | MCF10A-GM_5 | 143 | 0.1600 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.13383 | -0.0221 |
Alpelisib | 180622_BG_6 | 19252 | 0.0264 | 95 | 416 | 14 | 3 | Alpelisib | 0.033266667 | treatment | 72 | 2 | MCF10A-GM_3 | 511 | 0.0259 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | -0.00027 | 0.9831 |
Trametinib | 180622_BG_6 | 1799 | 0.0782 | 119 | 31 | 14 | 14 | Trametinib | 0.031603332 | treatment | 72 | 2 | MCF10A-GM_3 | 150 | 0.0770 | 832.0 | 168.3 | 20016 | 537.9 | 0.0261 | 0.05084 | 0.1830 |
Etoposide | 180614_BG_03 | 986 | 0.1017 | 86 | 23 | 14 | 4 | Etoposide | 3.193598006 | treatment | 72 | 1 | MCF10A-GM_5 | 109 | 0.0995 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.07955 | 0.0246 |
Taxol | 180614_BG_04 | 454 | 0.7472 | 175 | 295 | 14 | 15 | Paclitaxel | 0.312706472 | treatment | 72 | 1 | MCF10A-GM_8 | 470 | 0.5087 | 889.0 | 105.5 | 17054 | 348.0 | 0.0200 | 0.48866 | -0.1459 |