LINCS MCF 10A Common Project: Rolling-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Dataset 1 of 15: End-point cell counts and normalized growth rate inhibition values for all technical replicates of biological replicate 1. - Dataset (ID:20309)
Data Columns
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- 11 Data Columns
| Name | Description | Display Name | Data Type | Unit | Precision | Readout Type | Replicate | Comments |
|---|---|---|---|---|---|---|---|---|
| cell | Cell reagent | Cell | cell | |||||
| smallMolecule | Small molecule perturbagen | Small Molecule | small_molecule | |||||
| smallMolConcentrationUM | Small Mol Concentration (uM) | Text | uM | |||||
| timePointHr | Time Point (hr) | Numeric | hr | 2 | ||||
| totalCellCountBeforeTreatment | 50%-trimmed mean of the # of live-cell nuclei in a matched set of wells on the same plate at the time of treatment ( x0 ) | Total Cell Count Before Treatment | Numeric | 2 | ||||
| totalCellCountAfterTreatment | # of live-cell nuclei at the specified time point after treatment ( x(c,t) ) | Total Cell Count After Treatment | Numeric | 0 | ||||
| totalControlCellCount | 50%-trimmed mean of the # of live-cell nuclei in the DMSO-treated control wells on the same plate at the specified time point ( xctrl(t) ) | Total Control Cell Count | Numeric | 0 | ||||
| relativeCellCount | Measured # of live-cell nuclei for a given treatment at the specified time point ( x(c,t) ) divided by the 50%-trimmed mean of the number of live-cell nuclei in the DMSO-treated control wells on the same plate at the specified time point ( xctrl(t) ) | Relative Cell Count | Numeric | 4 | ||||
| normalizedGrowthRateInhibitionValue | Normalized growth rate inhibition value for treated cells at the specified time point | Normalized Growth Rate Inhibition Value | Numeric | 4 | ||||
| assayPlate | Assay Plate | Text | ||||||
| assayWell | Assay Well | Text |
- 11 Data Columns