High-content imaging of six breast cancer cell lines treated with a library of small molecule kinase inhibitors. - Dataset (ID:20244)
Data Columns
Download: Excel (XLSX), Comma-separated (CSV)
| Name | Description | Display Name | Data Type | Unit | Precision | Readout Type | Replicate | Comments |
|---|---|---|---|---|---|---|---|---|
| nuclearHaralickMoment2 | Haralick moment 2, measured in nucleus | Nuclear Haralick moment 2 | Numeric | 1 | ||||
| nuclearHaralickIdm | Haralick inverse difference moment, measured in nucleus | Nuclear Haralick IDM | Numeric | 4 | ||||
| nuclearHaralickEntropy | Haralick entropy, measured in nucleus | Nuclear Haralick entropy | Numeric | 3 | ||||
| nuclearHaralickContrast | Haralick contrast, measured in nucleus | Nuclear Haralick contrast | Numeric | 2 | ||||
| nuclearHaralickAsm | Haralick angular second moment, measured in nucleus | Nuclear Haralick ASM | Numeric | 4 | ||||
| nuclearperimeterPixels | Length of nuclear perimeter (pixels) | Nuclear perimeter (pixels) | Numeric | 0 | ||||
| ratioOfNuclearPerimeterToArea | Ratio of nuclear perimeter to area | Numeric | 4 | |||||
| numberOfNuclei | Number of nuclei | Numeric | 0 | |||||
| nuclearhalfwidthPixels | Half the width of the nucleus, perpendicular to the length (pixels) | Nuclear halfwidth (pixels) | Numeric | 2 | ||||
| nuclearlengthPixels | Length of the nucleus across the longest axis (pixels) | Nuclear length (pixels) | Numeric | 2 | ||||
| nuclearRoundness | Roundness of the nucleus | Nuclear roundness | Numeric | 3 | ||||
| cytoplasmperimeterPixels | Length of cytoplasm perimeter (pixels) | Cytoplasm perimeter (pixels) | Numeric | 0 | ||||
| ratioOfCytoplasmPerimeterToArea | Ratio of cytoplasm perimeter to area | Numeric | 4 | |||||
| 90QuantileofnuclearintensityAu | 90% of the nuclear pixel intensities are below this value (AU) | 90% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 80QuantileofnuclearintensityAu | 80% of the nuclear pixel intensities are below this value (AU) | 80% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 70QuantileofnuclearintensityAu | 70% of the nuclear pixel intensities are below this value (AU) | 70% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 60QuantileofnuclearintensityAu | 60% of the nuclear pixel intensities are below this value (AU) | 60% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 50QuantileofnuclearintensityAu | 50% of the nuclear pixel intensities are below this value (AU) | 50% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 40QuantileofnuclearintensityAu | 40% of the nuclear pixel intensities are below this value (AU) | 40% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 30QuantileofnuclearintensityAu | 30% of the nuclear pixel intensities are below this value (AU) | 30% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 20QuantileofnuclearintensityAu | 20% of the nuclear pixel intensities are below this value (AU) | 20% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 10QuantileofnuclearintensityAu | 10% of the nuclear pixel intensities are below this value (AU) | 10% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| stddevofcytoplasmintensityAu | Standard deviation of cytoplasmic intensity (AU) | Std Dev of cytoplasm intensity (AU) | Numeric | 2 | ||||
| cytoplasmintensityAu | Average cytoplasmic intensity (AU) | Cytoplasm intensity (AU) | Numeric | 2 | ||||
| stddevofnuclearintensityAu | Standard deviation of nuclear intensity (AU) | Std Dev of nuclear intensity (AU) | Numeric | 2 |