High-content imaging of six breast cancer cell lines treated with a library of small molecule kinase inhibitors. - Dataset (ID:20244)
Data Columns
Download: Excel (XLSX), Comma-separated (CSV)
| Name | Description | Display Name | Data Type | Unit | Precision | Readout Type | Replicate | Comments |
|---|---|---|---|---|---|---|---|---|
| cell | Cell reagent | Cell | cell | |||||
| smName | Small molecule perturbagen | SM Name | small_molecule | |||||
| smallMolConcentration | Small Mol Concentration | Text | ||||||
| smallMolConcUnit | Small Mol Conc Unit | Text | ||||||
| otherReagent1Name | Other reagent detected by fluorescence | Other Reagent 1 Name | other_reagent | |||||
| otherReagent1DetectionChannel | Other Reagent 1 Detection Channel | Numeric | 0 | |||||
| otherReagent2Name | Other reagent detected by fluorescence | Other Reagent 2 Name | other_reagent | |||||
| otherReagent2DetectionChannel | Other Reagent 2 Detection Channel | Numeric | 0 | |||||
| row | Row | Numeric | 0 | |||||
| column | Column | Numeric | 0 | |||||
| field | Field | Numeric | 0 | |||||
| xCoordinate | X-coordinate of the region of interest in the image field | X-coordinate | Numeric | 0 | ||||
| yCoordinate | Y-coordinate of the region of interest in the image field | Y-coordinate | Numeric | 0 | ||||
| image | Link to raw image file | Image | omero_image | |||||
| nuclearareaPixels | Area of the nucleus (pixels) | Nuclear area (pixels) | Numeric | 0 | ||||
| cytoplasmareaPixels | Area of the cytoplasm (pixels) | Cytoplasm area (pixels) | Numeric | 0 | ||||
| nuclearintensityAu | Average nuclear intensity (AU) | Nuclear intensity (AU) | Numeric | 1 | ||||
| stddevofnuclearintensityAu | Standard deviation of nuclear intensity (AU) | Std Dev of nuclear intensity (AU) | Numeric | 2 | ||||
| cytoplasmintensityAu | Average cytoplasmic intensity (AU) | Cytoplasm intensity (AU) | Numeric | 2 | ||||
| stddevofcytoplasmintensityAu | Standard deviation of cytoplasmic intensity (AU) | Std Dev of cytoplasm intensity (AU) | Numeric | 2 | ||||
| 10QuantileofnuclearintensityAu | 10% of the nuclear pixel intensities are below this value (AU) | 10% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 20QuantileofnuclearintensityAu | 20% of the nuclear pixel intensities are below this value (AU) | 20% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 30QuantileofnuclearintensityAu | 30% of the nuclear pixel intensities are below this value (AU) | 30% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 40QuantileofnuclearintensityAu | 40% of the nuclear pixel intensities are below this value (AU) | 40% quantile of nuclear intensity (AU) | Numeric | 0 | ||||
| 50QuantileofnuclearintensityAu | 50% of the nuclear pixel intensities are below this value (AU) | 50% quantile of nuclear intensity (AU) | Numeric | 0 |