RNAseq:
RNAseq_Assay_Name:: RNAseq
RNAseq_Assay_Date:: 4/19/2016; 4/20/2016
RNAseq_Instrument:: NextSeq
RNAseq_Software_Version::
RNAseq_Single_Paired: Paired End
RNAseq_Read_Length_1: 75
RNAseq_Read_Length_2: 75
RNAseq_Strand_Specificity: Stranded
RNAseq_Library_starting_quantity: 500ng
RNAseq_RNA_Integrity_Number: 9
RNAseq_Lysis_method: RNeasy kit
RNAseq_Extraction_method: RNeasy kit
RNAseq_Fragmentation_method: TruSeq stranded mRNA kit
RNAseq_Size_selection_method: SPRI beads
RNAseq_Size_Range: 200-500
RNAseq_Spike-in_Controls: ERCC mix 2
RNAseq_Spike-in_Source: Ambion
RNAseq_Spike-in_Concentration: 1 ul of 1:100 dilution; 6.67ul of 1:500 dilution
RNAseq_Mean_Sequencing_Depth: 27 million reads/sample; 26.5 million reads/sample
RNAseq_Sequencing_Cycles: 75 paired end
RNAseq_Reference_Genome: GRCh37
RNAseq_Trim_metric: <30 (Phred)
RNAseq_Lib_prep_kit: TruSeq stranded mRNA kit
RNAseq_Biosample_Type: cell lines
RNAseq_Biosample_summary: human breast cell lines
RNAseq_Associated_SOPs: TruSeq stranded mRNA kit
RNAseq_Replication_Type: single samples
RNAseq_Replication_Count: 1
RNAseq_Library_Prep_Date: 2/18/2016; 3/29/2016
RNAseq_Library_Date_Extracted: 2/12/2016; 3/11/2016
RNAseq_Spike-in_Time: Spike-in added to extracted RNA before library prep
RNAseq_Library_Indexing_Basepairing: 6
RNAseq_Barcode: n/a
RNAseq_cDNA_Preparation_Method: Random
RNAseq_PCR_Cycle_Number: 10
RNAseq_Sequencing_Facility: Bauer core
RNAseq_Sequencing_Chemistry_Version: v2
RNAseq_Raw_File_Type: fastq
RNAseq_Raw_File_Replicate_Number:
RNAseq_Plate_Format: 19; 20
RNAseq_Temperature:
RNAseq_Complexity_Perturbagen: n/a
RNAseq_Complexity_Concentration: n/a
RNAseq_Complexity_Cell_Type: Multiple
RNAseq_Complexity_Cell_Density: Multiple
RNAseq_Complexity_Time_Point: n/a
RNAseq_Complexity_Perturbagen_Number: n/a
RNAseq_Concentration: n/a
RNAseq_Time_Point: n/a