Breast Cancer Cell Density: Imaging assay of the density- and context-dependence of small molecule perturbagen response in breast cancer cell lines. Dataset 2 of 3: Mean cell count and mean normalized growth rate inhibition values across all replicates. - Dataset (ID:20257)
Download: Excel (XLSX), Comma-separated (CSV)
| Cell | Small Molecule | Small Mol Concentration | Small Mol Conc Unit | Replicate | Seeding Density | Mean Total Cell Count Before Treatment | Mean Total Cell Count After Treatment | Mean Total Control Cell Count | Mean Relative Cell Count | Mean Normalized Growth Rate Inhibition Value |
|---|---|---|---|---|---|---|---|---|---|---|
| MCF7 | Methotrexate | 1 | uM | 1 | 5000.00 | 1498.27 | 2563.00 | 4705.25 | 0.5446 | 0.3832 |
| MCF7 | Methotrexate | 3.1623 | uM | 1 | 5000.00 | 1498.27 | 2666.67 | 4705.25 | 0.5678 | 0.4193 |
| MCF7 | Methotrexate | 10 | uM | 1 | 5000.00 | 1498.27 | 2553.33 | 4705.25 | 0.5429 | 0.3808 |
| MCF7 | Taxol | 0.00016596 | uM | 1 | 5000.00 | 1498.27 | 5018.00 | 4705.25 | 1.0685 | 1.0835 |
| MCF7 | Taxol | 0.00033113 | uM | 1 | 5000.00 | 1498.27 | 4787.33 | 4705.25 | 1.0204 | 1.0262 |
| MCF7 | Taxol | 0.001 | uM | 1 | 5000.00 | 1498.27 | 3941.67 | 4705.25 | 0.8372 | 0.7947 |
| MCF7 | Taxol | 0.0031623 | uM | 1 | 5000.00 | 1498.27 | 3198.67 | 4705.25 | 0.6784 | 0.5783 |
| MCF7 | Taxol | 0.01 | uM | 1 | 5000.00 | 1498.27 | 1912.33 | 4705.25 | 0.4069 | 0.1592 |
| MCF7 | Taxol | 0.031623 | uM | 1 | 5000.00 | 1498.27 | 1990.67 | 4705.25 | 0.4225 | 0.1853 |
| MCF7 | Taxol | 0.1 | uM | 1 | 5000.00 | 1498.27 | 1803.00 | 4705.25 | 0.3835 | 0.1183 |
| MCF7 | Taxol | 0.31623 | uM | 1 | 5000.00 | 1498.27 | 1734.67 | 4705.25 | 0.3681 | 0.0902 |
| MCF7 | Taxol | 1 | uM | 1 | 5000.00 | 1498.27 | 1696.67 | 4705.25 | 0.3599 | 0.0747 |
| MCF7 | Etoposide | 0.0033113 | uM | 1 | 5000.00 | 1498.27 | 5163.67 | 5071.08 | 1.0188 | 1.0203 |
| MCF7 | Etoposide | 0.01 | uM | 1 | 5000.00 | 1498.27 | 4721.67 | 5071.08 | 0.9307 | 0.9191 |
| MCF7 | Etoposide | 0.031623 | uM | 1 | 5000.00 | 1498.27 | 4894.33 | 5071.08 | 0.9650 | 0.9597 |
| MCF7 | Etoposide | 0.1 | uM | 1 | 5000.00 | 1498.27 | 4897.00 | 5071.08 | 0.9656 | 0.9598 |
| MCF7 | Etoposide | 0.31623 | uM | 1 | 5000.00 | 1498.27 | 4496.00 | 5071.08 | 0.8868 | 0.8676 |
| MCF7 | Etoposide | 1 | uM | 1 | 5000.00 | 1498.27 | 3765.67 | 5071.08 | 0.7425 | 0.6884 |
| MCF7 | Etoposide | 3.1623 | uM | 1 | 5000.00 | 1498.27 | 2819.67 | 5071.08 | 0.5561 | 0.4326 |
| MCF7 | Etoposide | 10 | uM | 1 | 5000.00 | 1498.27 | 2274.33 | 5071.08 | 0.4488 | 0.2679 |
| MCF7 | Etoposide | 19.9526 | uM | 1 | 5000.00 | 1498.27 | 2244.00 | 5071.08 | 0.4425 | 0.2580 |
| MCF7 | Nilotinib | 0.0033113 | uM | 1 | 5000.00 | 1498.27 | 4871.00 | 5071.08 | 0.9608 | 0.9552 |
| MCF7 | Nilotinib | 0.01 | uM | 1 | 5000.00 | 1498.27 | 5275.67 | 5071.08 | 1.0402 | 1.0452 |
| MCF7 | Nilotinib | 0.031623 | uM | 1 | 5000.00 | 1498.27 | 5216.00 | 5071.08 | 1.0289 | 1.0327 |
| MCF7 | Nilotinib | 0.1 | uM | 1 | 5000.00 | 1498.27 | 4753.33 | 5071.08 | 0.9375 | 0.9281 |