Breast Cancer Cell Density: Imaging assay of the density- and context-dependence of small molecule perturbagen response in breast cancer cell lines. Dataset 2 of 3: Mean cell count and mean normalized growth rate inhibition values across all replicates. - Dataset (ID:20257)
Download: Excel (XLSX), Comma-separated (CSV)
| Cell | Small Molecule | Small Mol Concentration | Small Mol Conc Unit | Replicate | Seeding Density | Mean Total Cell Count Before Treatment | Mean Total Cell Count After Treatment | Mean Total Control Cell Count | Mean Relative Cell Count | Mean Normalized Growth Rate Inhibition Value |
|---|---|---|---|---|---|---|---|---|---|---|
| Hs 578T | Methotrexate | 0.031623 | uM | 1 | 2500.00 | 1203.29 | 2345.00 | 2259.00 | 1.0604 | 1.3689 |
| Hs 578T | Methotrexate | 0.1 | uM | 1 | 2500.00 | 1203.29 | 2033.67 | 2259.00 | 0.8833 | 0.6178 |
| Hs 578T | Methotrexate | 0.31623 | uM | 1 | 2500.00 | 1203.29 | 1715.33 | 2259.00 | 0.7233 | 0.2634 |
| Hs 578T | Methotrexate | 1 | uM | 1 | 2500.00 | 1203.29 | 1754.00 | 2259.00 | 0.7578 | 0.3398 |
| Hs 578T | Methotrexate | 3.1623 | uM | 1 | 2500.00 | 1203.29 | 1740.00 | 2259.00 | 0.7701 | 0.4117 |
| Hs 578T | Methotrexate | 10 | uM | 1 | 2500.00 | 1203.29 | 1823.00 | 2259.00 | 0.7985 | 0.4505 |
| Hs 578T | Taxol | 0.00016596 | uM | 1 | 2500.00 | 1203.29 | 2109.67 | 2259.00 | 0.9209 | 0.7226 |
| Hs 578T | Taxol | 0.00033113 | uM | 1 | 2500.00 | 1203.29 | 2360.33 | 2259.00 | 1.0601 | 1.3001 |
| Hs 578T | Taxol | 0.001 | uM | 1 | 2500.00 | 1203.29 | 2139.67 | 2259.00 | 0.9134 | 0.6378 |
| Hs 578T | Taxol | 0.0031623 | uM | 1 | 2500.00 | 1203.29 | 2115.00 | 2259.00 | 0.8952 | 0.5870 |
| Hs 578T | Taxol | 0.01 | uM | 1 | 2500.00 | 1203.29 | 1269.67 | 2259.00 | 0.5113 | -0.0399 |
| Hs 578T | Taxol | 0.031623 | uM | 1 | 2500.00 | 1203.29 | 1323.00 | 2259.00 | 0.5492 | -0.0266 |
| Hs 578T | Taxol | 0.1 | uM | 1 | 2500.00 | 1203.29 | 1175.00 | 2259.00 | 0.4755 | -0.1115 |
| Hs 578T | Taxol | 0.31623 | uM | 1 | 2500.00 | 1203.29 | 1127.33 | 2259.00 | 0.4633 | -0.1582 |
| Hs 578T | Taxol | 1 | uM | 1 | 2500.00 | 1203.29 | 1260.67 | 2259.00 | 0.5262 | -0.0736 |
| Hs 578T | Etoposide | 0.0033113 | uM | 1 | 2500.00 | 1203.29 | 2485.33 | 2447.42 | 1.0148 | 1.0268 |
| Hs 578T | Etoposide | 0.01 | uM | 1 | 2500.00 | 1203.29 | 2384.00 | 2447.42 | 0.9746 | 0.9503 |
| Hs 578T | Etoposide | 0.031623 | uM | 1 | 2500.00 | 1203.29 | 2386.67 | 2447.42 | 0.9740 | 0.9452 |
| Hs 578T | Etoposide | 0.1 | uM | 1 | 2500.00 | 1203.29 | 2423.67 | 2447.42 | 0.9904 | 0.9813 |
| Hs 578T | Etoposide | 0.31623 | uM | 1 | 2500.00 | 1203.29 | 1973.00 | 2447.42 | 0.8083 | 0.6261 |
| Hs 578T | Etoposide | 1 | uM | 1 | 2500.00 | 1203.29 | 1284.33 | 2447.42 | 0.5197 | 0.0449 |
| Hs 578T | Etoposide | 3.1623 | uM | 1 | 2500.00 | 1203.29 | 1160.33 | 2447.42 | 0.4722 | -0.0450 |
| Hs 578T | Etoposide | 10 | uM | 1 | 2500.00 | 1203.29 | 881.33 | 2447.42 | 0.3570 | -0.2725 |
| Hs 578T | Etoposide | 19.9526 | uM | 1 | 2500.00 | 1203.29 | 1087.00 | 2447.42 | 0.4415 | -0.1060 |
| Hs 578T | Nilotinib | 0.0033113 | uM | 1 | 2500.00 | 1203.29 | 2523.67 | 2447.42 | 1.0301 | 1.0560 |