LINCS Pilot Phase Joint Project: Sensitivity measures of six breast cancer cell lines to a library of small molecule kinase inhibitors (single drug treatments). Dataset 3 of 15: Cell count and relative growth within biological replicate 3. - Dataset (ID:20239)
Data Columns
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- 14 Data Columns
| Name | Description | Display Name | Data Type | Unit | Precision | Readout Type | Replicate | Comments |
|---|---|---|---|---|---|---|---|---|
| cell | Cell reagent | Cell | cell | |||||
| smallMolecule | Small molecule perturbagen | Small Molecule | small_molecule | |||||
| smallMolConcentration | Small Mol Concentration | Text | ||||||
| smallMolConcUnit | Small Mol Conc Unit | Text | ||||||
| ljpLibraryPlate | LINCS Joint Project small molecule library plate | LJP Library Plate | Text | |||||
| replicate | Replicate | Numeric | 0 | |||||
| assayWell | Assay Well | Text | ||||||
| timepoint | Timepoint | Numeric | 0 | |||||
| timepointUnit | Timepoint Unit | Text | ||||||
| totalCellCountBeforeTreatment | # of nuclei before treatment in a matched set of wells based on Hoechst 33342 segmentation ( x0 ) | Total Cell Count Before Treatment | Numeric | 0 | ||||
| totalCellCountAfterTreatment | # of nuclei after treatment based on Hoechst 33342 segmentation ( x(c) ) | Total Cell Count After Treatment | Numeric | 0 | ||||
| totalControlCellCount | # of nuclei in a DMSO-treated control sample based on Hoechst 33342 segmentation ( x(0) ) | Total Control Cell Count | Numeric | 0 | ||||
| relativeCellCount | Total Cell Count After Treatment normalized to Total Control Cell Count | Relative Cell Count | Numeric | 4 | ||||
| relativeGrowthRateAfterTreatment | Growth rate of treated cells normalized to a DMSO-treated control | Relative Growth Rate After Treatment | Numeric | 4 |
- 14 Data Columns