LINCS MCF 10A Common Project: Rolling-time-point sensitivity measures of the MCF 10A breast cell line to 8 small molecule perturbagens. Dataset 1 of 15: End-point cell counts and normalized growth rate inhibition values for all technical replicates of biological replicate 1. - Dataset (ID:20309)

Data Columns

  • 11 Data Columns
Name Description Display Name Data Type Unit Precision Readout Type Replicate Comments
cell
Cell reagent
Cell cell
smallMolecule
Small molecule perturbagen
Small Molecule small_molecule
smallMolConcentrationUM Small Mol Concentration (uM) Text uM
timePointHr Time Point (hr) Numeric hr 2
totalCellCountBeforeTreatment
50%-trimmed mean of the # of live-cell nuclei in a matched set of wells on the same plate at the time of treatment ( x0 )
Total Cell Count Before Treatment Numeric 2
totalCellCountAfterTreatment
# of live-cell nuclei at the specified time point after treatment ( x(c,t) )
Total Cell Count After Treatment Numeric 0
totalControlCellCount
50%-trimmed mean of the # of live-cell nuclei in the DMSO-treated control wells on the same plate at the specified time point ( xctrl(t) )
Total Control Cell Count Numeric 0
relativeCellCount
Measured # of live-cell nuclei for a given treatment at the specified time point ( x(c,t) ) divided by the 50%-trimmed mean of the number of live-cell nuclei in the DMSO-treated control wells on the same plate at the specified time point ( xctrl(t) )
Relative Cell Count Numeric 4
normalizedGrowthRateInhibitionValue
Normalized growth rate inhibition value for treated cells at the specified time point
Normalized Growth Rate Inhibition Value Numeric 4
assayPlate Assay Plate Text
assayWell Assay Well Text
  • 11 Data Columns