High-content imaging of six breast cancer cell lines treated with a library of small molecule kinase inhibitors. - Dataset (ID:20244)

Data Columns

  • Page 1 of 8
  • 1 to 25 of 192 Data Columns
Name Description Display Name Data Type Unit Precision Readout Type Replicate Comments
cell
Cell reagent
Cell cell
smName
Small molecule perturbagen
SM Name small_molecule
smallMolConcentration Small Mol Concentration Text
smallMolConcUnit Small Mol Conc Unit Text
otherReagent1Name
Other reagent detected by fluorescence
Other Reagent 1 Name other_reagent
otherReagent1DetectionChannel Other Reagent 1 Detection Channel Numeric 0
otherReagent2Name
Other reagent detected by fluorescence
Other Reagent 2 Name other_reagent
otherReagent2DetectionChannel Other Reagent 2 Detection Channel Numeric 0
row Row Numeric 0
column Column Numeric 0
field Field Numeric 0
xCoordinate
X-coordinate of the region of interest in the image field
X-coordinate Numeric 0
yCoordinate
Y-coordinate of the region of interest in the image field
Y-coordinate Numeric 0
image
Link to raw image file
Image omero_image
nuclearareaPixels
Area of the nucleus (pixels)
Nuclear area (pixels) Numeric 0
cytoplasmareaPixels
Area of the cytoplasm (pixels)
Cytoplasm area (pixels) Numeric 0
nuclearintensityAu
Average nuclear intensity (AU)
Nuclear intensity (AU) Numeric 1
stddevofnuclearintensityAu
Standard deviation of nuclear intensity (AU)
Std Dev of nuclear intensity (AU) Numeric 2
cytoplasmintensityAu
Average cytoplasmic intensity (AU)
Cytoplasm intensity (AU) Numeric 2
stddevofcytoplasmintensityAu
Standard deviation of cytoplasmic intensity (AU)
Std Dev of cytoplasm intensity (AU) Numeric 2
10QuantileofnuclearintensityAu
10% of the nuclear pixel intensities are below this value (AU)
10% quantile of nuclear intensity (AU) Numeric 0
20QuantileofnuclearintensityAu
20% of the nuclear pixel intensities are below this value (AU)
20% quantile of nuclear intensity (AU) Numeric 0
30QuantileofnuclearintensityAu
30% of the nuclear pixel intensities are below this value (AU)
30% quantile of nuclear intensity (AU) Numeric 0
40QuantileofnuclearintensityAu
40% of the nuclear pixel intensities are below this value (AU)
40% quantile of nuclear intensity (AU) Numeric 0
50QuantileofnuclearintensityAu
50% of the nuclear pixel intensities are below this value (AU)
50% quantile of nuclear intensity (AU) Numeric 0
  • Page 1 of 8
  • 1 to 25 of 192 Data Columns